Evidence map›Paper›PMID 28874660›Full record

ArticleNature communications2017

Integrative genomics of microglia implicates DLG4 (PSD95) in the white matter development of preterm infants.

Michelle L Krishnan, Juliette Van Steenwinckel, Anne-Laure Schang, Jun Yan, Johanna Arnadottir, Tifenn Le Charpentier, Zsolt Csaba, Pascal Dournaud, Sara Cipriani, Constance Auvynet and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed, 3 pooled it
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 3 syntheses or guidelines pooled it, 104 citations in OpenAlex.

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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 8 institutions in 3 countries.

Michelle L KrishnanCentre for the Developing Brain, Department of Perinatal Imaging and Health, Division of Imaging Sciences and Biomedical Engineering, King's College London, King's Health Partners, St. Thomas' Hospital, London, SE1 7EH, UK.
Juliette Van SteenwinckelPROTECT, INSERM, Université Paris Diderot, Sorbonne Paris Cité, Paris, 75014, France.
Anne-Laure SchangPROTECT, INSERM, Université Paris Diderot, Sorbonne Paris Cité, Paris, 75014, France.
Jun YanPROTECT, INSERM, Université Paris Diderot, Sorbonne Paris Cité, Paris, 75014, France.
Johanna ArnadottirPROTECT, INSERM, Université Paris Diderot, Sorbonne Paris Cité, Paris, 75014, France.
Tifenn Le CharpentierPROTECT, INSERM, Université Paris Diderot, Sorbonne Paris Cité, Paris, 75014, France.
Zsolt CsabaPROTECT, INSERM, Université Paris Diderot, Sorbonne Paris Cité, Paris, 75014, France.
Pascal DournaudPROTECT, INSERM, Université Paris Diderot, Sorbonne Paris Cité, Paris, 75014, France.
Sara CiprianiPROTECT, INSERM, Université Paris Diderot, Sorbonne Paris Cité, Paris, 75014, France.
Constance AuvynetPierre and Marie Curie University, UMRS-1135, Sorbonne Paris Cité, F-75006, Paris, France.
Luigi TitomanlioPROTECT, INSERM, Université Paris Diderot, Sorbonne Paris Cité, Paris, 75014, France.
Julien PansiotPROTECT, INSERM, Université Paris Diderot, Sorbonne Paris Cité, Paris, 75014, France.
Gareth BallCentre for the Developing Brain, Department of Perinatal Imaging and Health, Division of Imaging Sciences and Biomedical Engineering, King's College London, King's Health Partners, St. Thomas' Hospital, London, SE1 7EH, UK.ORCID http://orcid.org/0000-0003-3509-1435
James P BoardmanMedical Research Council/University of Edinburgh Centre for Reproductive Health, Edinburgh, EH16 4TJ, UK.ORCID http://orcid.org/0000-0003-3904-8960
Andrew J WalleyCell Biology and Genetics Research Centre, St. George's University of London, London, SW17 0RE, UK.ORCID http://orcid.org/0000-0001-7707-7549
Alka SaxenaGenomics Core Facility, NIHR Biomedical Research Centre, Guy's and St. Thomas' NHS Foundation Trust, London, SE1 9RT, UK.
Ghazala MirzaDepartment of Clinical and Experimental Epilepsy, UCL Institute of Neurology, London, WC1N 3BG, UK.
Bobbi FleissCentre for the Developing Brain, Department of Perinatal Imaging and Health, Division of Imaging Sciences and Biomedical Engineering, King's College London, King's Health Partners, St. Thomas' Hospital, London, SE1 7EH, UK.ORCID http://orcid.org/0000-0001-7828-673X
A David EdwardsCentre for the Developing Brain, Department of Perinatal Imaging and Health, Division of Imaging Sciences and Biomedical Engineering, King's College London, King's Health Partners, St. Thomas' Hospital, London, SE1 7EH, UK. ad.edwards@kcl.ac.uk.ORCID http://orcid.org/0000-0003-4801-7066
Enrico PetrettoDuke-NUS Medical School, 8 College Road, Singapore, 169857, Singapore. enrico.petretto@duke-nus.edu.sg.
Pierre GressensCentre for the Developing Brain, Department of Perinatal Imaging and Health, Division of Imaging Sciences and Biomedical Engineering, King's College London, King's Health Partners, St. Thomas' Hospital, London, SE1 7EH, UK. pierre.gressens@inserm.fr.
Inserm · FRSt Thomas' Hospital · GBDuke-NUS Medical School · SGGuy's and St Thomas' NHS Foundation Trust · GBMRC Centre for Reproductive Health · GBSt George's, University of London · GBUniversité Paris Cité · FRUniversity College London · GB

Funding

Department of Health RP-PG-0707-10154Medical Research Council MC_U120097112Medical Research Council MR/J014311/1Medical Research Council MR/K006355/1Medical Research Council MR/L001578/1Medical Research Council MR/N026063/1Wellcome Trust
6 · The paper itself

Abstract

Preterm birth places infants in an adverse environment that leads to abnormal brain development and cerebral injury through a poorly understood mechanism known to involve neuroinflammation. In this study, we integrate human and mouse molecular and neuroimaging data to investigate the role of microglia in preterm white matter damage. Using a mouse model where encephalopathy of prematurity is induced by systemic interleukin-1β administration, we undertake gene network analysis of the microglial transcriptomic response to injury, extend this by analysis of protein-protein interactions, transcription factors and human brain gene expression, and translate findings to living infants using imaging genomics. We show that DLG4 (PSD95) protein is synthesised by microglia in immature mouse and human, developmentally regulated, and modulated by inflammation; DLG4 is a hub protein in the microglial inflammatory response; and genetic variation in DLG4 is associated with structural differences in the preterm infant brain. DLG4 is thus apparently involved in brain development and impacts inter-individual susceptibility to injury after preterm birth.Inflammation mediated by microglia plays a key role in brain injury associated with preterm birth, but little is known about the microglial response in preterm infants. Here, the authors integrate molecular and imaging data from animal models and preterm infants, and find that microglial expression of DLG4 plays a role.

Indexed as

GenomicsAnimalsBrainDisks Large Homolog 4 ProteinGene Expression RegulationGene Regulatory NetworksHumansInfant, NewbornInfant, PrematureInflammationInterleukin-1betaMagnetic Resonance ImagingMiceMicrogliaNeuropsychiatryProtein Interaction MapsDisks Large Homolog 4 ProteinDLG4 protein, humanInterleukin-1betaSTAT3 Transcription Factor

Identifiers

PMID28874660
PMCPMC5585205
OpenAlexW2751709067

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.