Evidence map›Paper›PMID 28874505›Full record

ArticleRNA (New York, N.Y.)2017

Molecular recognition of pre-tRNA by

Bradley P Klemm, Agnes Karasik, Kipchumba J Kaitany, Aranganathan Shanmuganathan, Matthew J Henley, Adam Z Thelen, Allison J L Dewar, Nathaniel D Jackson, Markos Koutmos, Carol A Fierke

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. The Dynamic Network of RNP RNase P Subunits.International journal of molecular sciences · 2021
    Review
  6. Structural basis of RNA processing by human mitochondrial RNase P.Nature structural & molecular biology · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Bradley P KlemmDepartment of Biological Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA.ORCID 0000-0003-3484-3711
Agnes KarasikDepartment of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814, USA.
Kipchumba J KaitanyDepartment of Biological Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA.
Aranganathan ShanmuganathanDepartment of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814, USA.
Matthew J HenleyProgram in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, USA.
Adam Z ThelenDepartment of Biological Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA.
Allison J L DewarDepartment of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA.
Nathaniel D JacksonDepartment of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814, USA.
Markos KoutmosDepartment of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814, USA.ORCID 0000-0003-0933-6312
Carol A FierkeDepartment of Biological Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA.ORCID 0000-0002-1481-0579
University of Michigan · USUniformed Services University of the Health Sciences · US

Funding

ENZYMOLOGY OF RNA PROCESSING ENZYMESR01GM055387 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI FIERKE, CAROL A · 1997 to 2014
$4.3M
Structural and functional basis for protein-based eukaryotic RNA processingR01GM117141 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Markos Koutmos · 2016 to 2026
$2.5M
NIGMS NIH HHS R01 GM055387NIGMS NIH HHS R01 GM117141
6 · The paper itself

Abstract

Protein-only ribonuclease P (PRORP) is an enzyme responsible for catalyzing the 5' end maturation of precursor transfer ribonucleic acids (pre-tRNAs) encoded by various cellular compartments in many eukaryotes. PRORPs from plants act as single-subunit enzymes and have been used as a model system for analyzing the function of the metazoan PRORP nuclease subunit, which requires two additional proteins for efficient catalysis. There are currently few molecular details known about the PRORP-pre-tRNA complex. Here, we characterize the determinants of substrate recognition by the single subunit

Indexed as

ArabidopsisArabidopsis ProteinsBase SequenceNucleic Acid ConformationRibonuclease PRNA, PlantRNA PrecursorsRNA, TransferArabidopsis ProteinsPRORP1 protein, ArabidopsisPRORP2 protein, ArabidopsisRibonuclease PRNA, PlantRNA PrecursorsRNA, Transfermolecular recognitionPPRpre-tRNAPRORPRNase P

Identifiers

PMID28874505
PMCPMC5689006
OpenAlexW2751317379

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.