Evidence map›Paper›PMID 28872980›Full record

ArticleAutophagy2017

The recycling endosome protein RAB-10 promotes autophagic flux and localization of the transmembrane protein ATG-9.

N J Palmisano, N Rosario, M Wysocki, M Hong, B Grant, A Meléndez

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Host Cell Signatures of the Envelopment Site within Beta-Herpes Virions.International journal of molecular sciences · 2022
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Autophagy in C. elegans development.Developmental biology · 2019
    Review
  15. Methods to Determine the Role of Autophagy Proteins in C. elegans Aging.Methods in molecular biology (Clifton, N.J.) · 2019
    Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

N J Palmisanoa Biology Department, Queens College, CUNY , Flushing , NY , USA.
N Rosarioa Biology Department, Queens College, CUNY , Flushing , NY , USA.
M Wysockia Biology Department, Queens College, CUNY , Flushing , NY , USA.
M Honga Biology Department, Queens College, CUNY , Flushing , NY , USA.
B Grantc Department of Molecular Biology and Biochemistry , Rutgers University , Piscataway , NJ , USA.
A Meléndeza Biology Department, Queens College, CUNY , Flushing , NY , USA.
Queens College, CUNY · USRutgers, The State University of New Jersey · USThe Graduate Center, CUNY · US

Funding

Membrane Traffic in C. elegans and MammalsR01GM067237 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI GRANT, BARTH DEMIAN · 2003 to 2019
$6.1M
Role of autophagy and retromer genes in GLP-1/Notch signalingR15GM102846 · NIGMS · QUEENS COLLEGE · PI MELENDEZ, ALICIA · 2012 to 2020
$1.2M
NIGMS NIH HHS R01 GM067237NIGMS NIH HHS R15 GM102846
6 · The paper itself

Abstract

Macroautophagy/autophagy involves the formation of an autophagosome, a double-membrane vesicle that delivers sequestered cytoplasmic cargo to lysosomes for degradation and recycling. Closely related, endocytosis mediates the sorting and transport of cargo throughout the cell, and both processes are important for cellular homeostasis. However, how endocytic proteins functionally intersect with autophagy is not clear. Mutations in the DAF-2/insulin-like IGF-1 (INSR) receptor at the permissive temperature result in a small increase in GFP::LGG-1 foci, i.e. autophagosomes, but a large increase at the nonpermissive temperature, allowing us to control the level of autophagy. In a RNAi screen for endocytic genes that alter the expression of GFP::LGG-1 in daf-2 mutants, we identified RAB-10, a small GTPase that regulates basolateral endocytosis. Loss of rab-10 in daf-2 mutants results in more GFP::LGG-1-positive foci at the permissive, but less GFP::LGG-1 or SQST-1::GFP foci at the nonpermissive temperature. As previously reported, loss of rab-10 alone resulted in an increase of GFP:LGG-1 foci. Exposure of rab-10 mutant animals to chloroquine, a known inhibitor of autophagic flux, failed to increase the number of GFP::LGG-1 foci. Moreover, colocalization between LMP-1::tagRFP and GFP::LGG-1 (the lysosome and autophagosome reporters) was decreased in daf-2; rab-10 dauers at the nonpermissive temperature. Intriguingly, RAB-10 was required to maintain the normal size of GFP::ATG-9-positive structures in daf-2 mutants at both the permissive and nonpermissive temperature. Finally, we found that RAB-10 GTPase cycling was required to control the size of GFP::ATG-9 foci. Collectively, our data support a model where rab-10 controls autophagic flux by regulating autophagosome formation and maturation.

Indexed as

AnimalsAnimals, Genetically ModifiedAutophagosomesAutophagyAutophagy-Related ProteinsCaenorhabditis elegansCaenorhabditis elegans ProteinsEndocytosisEndosomesLysosomesMembrane ProteinsProtein Processing, Post-TranslationalProtein Transportrab GTP-Binding Proteinsatg-9 protein, C elegansAutophagy-Related ProteinsCaenorhabditis elegans ProteinsMembrane ProteinsRAB-10 protein, C elegansrab GTP-Binding Proteinsatg-9autophagydaf-2/INSRdauerendocytosisGFP::ATG-9GFP::LGG-1rab-10recycling endosome

Identifiers

PMID28872980
PMCPMC5640181
OpenAlexW2751462620

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.