Evidence map›Paper›PMID 28871207›Full record

ArticleScientific reports2017

Optical-flow based non-invasive analysis of cardiomyocyte contractility.

Andras Czirok, Dona Greta Isai, Edina Kosa, Sheeja Rajasingh, William Kinsey, Zoltan Neufeld, Johnson Rajasingh

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Andras CzirokDepartment of Anatomy & Cell Biology, University of Kansas Medical Center, Kansas City, KS, USA. aczirok@gmail.com.ORCID 0000-0002-2694-5163
Dona Greta IsaiDepartment of Anatomy & Cell Biology, University of Kansas Medical Center, Kansas City, KS, USA.
Edina KosaDepartment of Anatomy & Cell Biology, University of Kansas Medical Center, Kansas City, KS, USA.
Sheeja RajasinghDepartment of Anatomy & Cell Biology, University of Kansas Medical Center, Kansas City, KS, USA.
William KinseyDepartment of Anatomy & Cell Biology, University of Kansas Medical Center, Kansas City, KS, USA.
Zoltan NeufeldDepartment of Mathematics, University of Queensland, Brisbane, Australia.
Johnson RajasinghDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS, USA.ORCID 0000-0002-6172-4083

Funding

PYK2 function during fertilizationR01HD062860 · NICHD · UNIVERSITY OF KANSAS MEDICAL CENTER · PI KINSEY, WILLIAM H. · 2010 to 2020
$2.9M
Morphogenetic Tissue Movements in Early EmbryosR01GM102801 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI CZIROK, ANDRAS · 2014 to 2017
$1.1M
NICHD NIH HHS R01 HD062860NIGMS NIH HHS R01 GM102801
6 · The paper itself

Abstract

Characterization of cardiomyocyte beat patterns is needed for quality control of cells intended for surgical injection as well as to establish phenotypes in disease modeling or toxicity studies. Optical-flow based analysis of videomicroscopic recordings offer a manipulation-free and efficient characterization of contractile cycles, an important characteristics of cardiomyocyte phenotype. We demonstrate that by appropriate computational analysis of optical flow data one can identify distinct contractile centers and distinguish active cell contractility from passive elastic tissue deformations. Our proposed convergence measure correlates with myosin IIa immuno-localization and is capable to resolve contractile waves and their synchronization within maturing, unlabeled induced pluripotent stem cell-derived cardiomyocyte cultures.

Indexed as

Cell DifferentiationCells, CulturedCellular ReprogrammingComputational BiologyHumansInduced Pluripotent Stem CellsMicroscopy, VideoMyocardial ContractionMyocytes, CardiacNonmuscle Myosin Type IIANonmuscle Myosin Type IIA

Identifiers

PMID28871207
PMCPMC5583397

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.