Evidence map›Paper›PMID 28871082›Full record

ArticleNature communications2017

Stromal and epithelial transcriptional map of initiation progression and metastatic potential of human prostate cancer.

Svitlana Tyekucheva, Michaela Bowden, Clyde Bango, Francesca Giunchi, Ying Huang, Chensheng Zhou, Arrigo Bondi, Rosina Lis, Mieke Van Hemelrijck, Ove Andrén and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 132 citations in OpenAlex.

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21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 10 institutions in 5 countries.

Svitlana TyekuchevaDepartment of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, 450 Brookline Ave, Boston, MA, 02215, USA.
Michaela BowdenDepartment of Medical Oncology, Dana-Farber Cancer Institute, 450 Brookline Ave, Boston, MA, 02215, USA.
Clyde BangoDepartment of Oncologic Pathology, Dana-Farber Cancer Institute, 450 Brookline Ave, Boston, MA, 02215, USA.
Francesca GiunchiDepartment of Pathology, Addarii Institute of Oncology, S.Orsola-Malpighi Teaching Hospital, University of Bologna, Viale Ercolani 4/2, 40138, Bologna, Italy.
Ying HuangDepartment of Oncologic Pathology, Dana-Farber Cancer Institute, 450 Brookline Ave, Boston, MA, 02215, USA.
Chensheng ZhouDepartment of Medical Oncology, Dana-Farber Cancer Institute, 450 Brookline Ave, Boston, MA, 02215, USA.ORCID http://orcid.org/0000-0001-6593-7994
Arrigo BondiDepartment of Surgical Pathology, Maggiore Hospital, Largo Nigrisoli 2, 40133, Bologna, Italy.
Rosina LisDepartment of Medical Oncology, Dana-Farber Cancer Institute, 450 Brookline Ave, Boston, MA, 02215, USA.
Mieke Van HemelrijckKing's College London, Division of Cancer Studies, Translational Oncology & Urology Research, Guy's Hospital, London, SE1 9RT, UK.
Ove AndrénDepartment of Urology, School of Health and Medical Sciences, Örebro University Hospital, Örebro, SE 701 85, Sweden.
Sven-Olof AnderssonDepartment of Urology, School of Health and Medical Sciences, Örebro University Hospital, Örebro, SE 701 85, Sweden.
R William WatsonSchool of Medicine, UCD Conway Institute of Biomolecular and Biomedical Research, University College Dublin, Belfield, Dublin, 4, Ireland.
Stephen PenningtonSchool of Medicine, UCD Conway Institute of Biomolecular and Biomedical Research, University College Dublin, Belfield, Dublin, 4, Ireland.
Stephen P FinnDepartment of Histopathology and Morbid Anatomy, School of Medicine, Trinity College Dublin, Dublin, Ireland.
Neil E MartinDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Brigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.
Meir J StampferChanning Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, 181 Longwood Ave, Boston, MA, 02115, USA.
Giovanni ParmigianiDepartment of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, 450 Brookline Ave, Boston, MA, 02215, USA.
Kathryn L PenneyChanning Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, 181 Longwood Ave, Boston, MA, 02115, USA.
Michelangelo FiorentinoDepartment of Pathology, Addarii Institute of Oncology, S.Orsola-Malpighi Teaching Hospital, University of Bologna, Viale Ercolani 4/2, 40138, Bologna, Italy.
Lorelei A MucciChanning Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, 181 Longwood Ave, Boston, MA, 02115, USA.
Massimo LodaDepartment of Oncologic Pathology, Dana-Farber Cancer Institute, 450 Brookline Ave, Boston, MA, 02215, USA. massimo_loda@dfci.harvard.edu.
Brigham and Women's Hospital · USDana-Farber Cancer Institute · USHarvard University · USIRCCS Azienda Ospedliero-Universitaria di Bologna Policlinico di Sant'Orsola · ITÖrebro University · SEUniversity College Dublin · IEBroad Institute · USGuy's Hospital · GBOspedale Maggiore · ITTrinity College Dublin · IE

Funding

Tumor and Circulating Markers as Links Between Obesity and Lethal Prostate CanceP50CA090381 · NCI · DANA-FARBER CANCER INSTITUTE · PI LODA, MASSIMO · 2002 to 2017
$36.2M
Molecular Link Between Metabolic Syndrome and Prostate CancerR01CA131945 · NCI · DANA-FARBER CANCER INST · PI LODA, MASSIMO · 2008 to 2018
$4.0M
Targeting the p110beta isoform of PI3 kinase in prostate cancerR01CA187918 · NCI · DANA-FARBER CANCER INST · PI LODA, MASSIMO, ROBERTS, THOMAS M · 2015 to 2019
$2.8M
Bioinformatics Tools for Genomic Analysis of Tumor and Stromal Pathways in CancerR01CA174206 · NCI · DANA-FARBER CANCER INST · PI PARMIGIANI, GIOVANNI LUIGI · 2013 to 2017
$1.7M
Statistical methods for transcriptome profiling from archival tumor samplesR21CA185787 · NCI · DANA-FARBER CANCER INST · PI TYEKUCHEVA, SVITLANA · 2015 to 2016
$407k
NCI NIH HHS P50 CA090381NCI NIH HHS R01 CA131945NCI NIH HHS R01 CA174206NCI NIH HHS R01 CA187918NCI NIH HHS R21 CA185787Wellcome Trust
6 · The paper itself

Abstract

While progression from normal prostatic epithelium to invasive cancer is driven by molecular alterations, tumor cells and cells in the cancer microenvironment are co-dependent and co-evolve. Few human studies to date have focused on stroma. Here, we performed gene expression profiling of laser capture microdissected normal non-neoplastic prostate epithelial tissue and compared it to non-transformed and neoplastic low-grade and high-grade prostate epithelial tissue from radical prostatectomies, each with its immediately surrounding stroma. Whereas benign epithelium in prostates with and without tumor were similar in gene expression space, stroma away from tumor was significantly different from that in prostates without cancer. A stromal gene signature reflecting bone remodeling and immune-related pathways was upregulated in high compared to low-Gleason grade cases. In validation data, the signature discriminated cases that developed metastasis from those that did not. These data suggest that the microenvironment may influence prostate cancer initiation, maintenance, and metastatic progression.Stromal cells contribute to tumor development but the mechanisms regulating this process are still unclear. Here the authors analyze gene expression profiles in the prostate and show that stromal gene signature changes ahead of the epithelial gene signature as prostate cancer initiates and progresses.

Indexed as

Transcription, GeneticAgedBone and BonesDisease ProgressionEpithelial CellsEpitheliumGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMaleMiddle AgedNeoplasm MetastasisOligonucleotide Array Sequence AnalysisProstateProstatectomyProstatic Neoplasms

Identifiers

PMID28871082
PMCPMC5583238
OpenAlexW2752074361

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.