Evidence map›Paper›PMID 28870990›Full record

ArticleDevelopment (Cambridge, England)2017

Three-dimensional automated reporter quantification (3D-ARQ) technology enables quantitative screening in retinal organoids.

M Natalia Vergara, Miguel Flores-Bellver, Silvia Aparicio-Domingo, Minda McNally, Karl J Wahlin, Meera T Saxena, Jeff S Mumm, M Valeria Canto-Soler

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Toward Retinal Organoids in High-Throughput.Cold Spring Harbor perspectives in medicine · 2024
    Review
  12. Review
  13. Article
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

M Natalia VergaraThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA natalia.vergara@ucdenver.edu valeria.canto-soler@ucdenver.edu.ORCID 0000-0003-4545-8181
Miguel Flores-BellverThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Silvia Aparicio-DomingoThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Minda McNallyThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Karl J WahlinThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Meera T SaxenaThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Jeff S MummThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.ORCID 0000-0002-2575-287X
M Valeria Canto-SolerThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA natalia.vergara@ucdenver.edu valeria.canto-soler@ucdenver.edu.ORCID 0000-0001-8692-034X
Johns Hopkins University · US

Funding

Wilmer Core Grant for Vision ResearchP30EY001765 · NEI · JOHNS HOPKINS UNIVERSITY · PI Jiang Qian · 1985 to 2026
$22.1M
Genetic and Chemical Screens for Factors Regulating Retinal RegenerationR01EY022810 · NEI · JOHNS HOPKINS UNIVERSITY · PI MUMM, JEFFREY · 2013 to 2017
$2.1M
Novel models of Alzheimer's Disease and Related Disorders enabling systematic investigation of the therapeutic potential of transplanted hiPSC-derived cells and endogenous adult neural stem cellsR01OD020376 · OD · JOHNS HOPKINS UNIVERSITY · PI MUMM, JEFFREY · 2016 to 2020
$2.1M
Mechanisms of retinal cell differentiationR01EY022631 · NEI · UNIVERSITY OF COLORADO DENVER · PI CANTO-SOLER, MARIA VALERIA · 2012 to 2016
$2.0M
Robotic whole organism HTS platform for drug discovery and developmentR41TR000945 · NCATS · LUMINOMICS, INC. · PI MUMM, JEFFREY · 2014 to 2014
$225k
NCATS NIH HHS R41 TR000945NEI NIH HHS P30 EY001765NEI NIH HHS R01 EY022631NEI NIH HHS R01 EY022810NIH HHS R01 OD020376
6 · The paper itself

Abstract

The advent of stem cell-derived retinal organoids has brought forth unprecedented opportunities for developmental and physiological studies, while presenting new therapeutic promise for retinal degenerative diseases. From a translational perspective, organoid systems provide exciting new prospects for drug discovery, offering the possibility to perform compound screening in a three-dimensional (3D) human tissue context that resembles the native histoarchitecture and to some extent recapitulates cellular interactions. However, inherent variability issues and a general lack of robust quantitative technologies for analyzing organoids on a large scale pose severe limitations for their use in translational applications. To address this need, we have developed a screening platform that enables accurate quantification of fluorescent reporters in complex human iPSC-derived retinal organoids. This platform incorporates a fluorescence microplate reader that allows

Indexed as

Genetic TechniquesCell Culture TechniquesCell DifferentiationCell LineFluorescent DyesGenes, ReporterHumansInduced Pluripotent Stem CellsMicroscopy, FluorescenceOrganoidsOxidative StressRetinaStem Cell TransplantationTransgenesTranslational Research, BiomedicalFluorescent Dyes3D-ARQFluorescence reporter quantificationHumanRetinal organoidsScreening

Identifiers

PMID28870990
PMCPMC5675442
OpenAlexW2751345613

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.