Evidence map›Paper›PMID 28869005›Full record

ArticleThe Journal of general virology2017

Human interactome of the influenza B virus NS1 protein.

Corinna Patzina, Catherine H Botting, Adolfo García-Sastre, Richard E Randall, Benjamin G Hale

Open access · hybridAbstract read
In one paragraph

Article in The Journal of general virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  3. The Pleiotropic Effects of YBX1 on HTLV-1 Transcription.International journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Corinna PatzinaInstitute of Medical Virology, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland.
Catherine H BottingBiomedical Sciences Research Complex, University of St. Andrews, St. Andrews, Fife, KY16 9ST, UK.
Adolfo García-SastreIcahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, New York, NY 10029, USA.
Richard E RandallBiomedical Sciences Research Complex, University of St. Andrews, St. Andrews, Fife, KY16 9ST, UK.
Benjamin G HaleInstitute of Medical Virology, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland.
University of St Andrews · GBUniversity of Zurich · CHIcahn School of Medicine at Mount Sinai · US

Funding

Virus CoreU19AI106754 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ALBRECHT, RANDY A. · 2013 to 2017
$26.0M
NIAID NIH HHS HHSN272201400008CNIAID NIH HHS U19 AI106754Wellcome Trust
6 · The paper itself

Abstract

NS1 proteins of influenza A and B viruses share limited sequence homology, yet both are potent manipulators of host cell processes, particularly interferon (IFN) induction. Although many cellular partners are reported for A/NS1, only a few (e.g. PKR and ISG15) have been identified for B/NS1. Here, affinity-purification and mass spectrometry were used to expand the known host interactome of B/NS1. We identified 22 human proteins as new putative targets for B/NS1, validating several, including DHX9, ILF3, YBX1 and HNRNPC. Consistent with two RNA-binding domains in B/NS1, many of the identified factors bind RNA and some interact with B/NS1 in an RNA-dependent manner. Functional characterization of several B/NS1 interactors identified SNRNP200 as a potential positive regulator of host IFN responses, while ILF3 exhibited dual roles in both IFN induction and influenza B virus replication. These data provide a resource for future investigations into the mechanisms underpinning host cell modulation by influenza B virus NS1.

Indexed as

DEAD-box RNA HelicasesHumansInfluenza B virusInfluenza, HumanNeoplasm ProteinsNuclear Factor 90 ProteinsProtein BindingViral Nonstructural ProteinsY-Box-Binding Protein 1DEAD-box RNA HelicasesDHX9 protein, humanILF3 protein, humanINS1 protein, influenza virusNeoplasm ProteinsNuclear Factor 90 ProteinsViral Nonstructural ProteinsY-Box-Binding Protein 1YBX1 protein, human

Identifiers

PMID28869005
PMCPMC5656757
OpenAlexW2753609584

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.