Evidence map›Paper›PMID 28864971›Full record

ArticleEnvironmental science and pollution research international2017

Proteomics and

Chundan Zhang, Zhonghua Wang, Dijun Zhang, Jun Zhou, Chenyang Lu, Xiurong Su, Dewen Ding

Abstract read
PubMed Publisher
In one paragraph

Article in Environmental science and pollution research international, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Chundan ZhangSchool of Marine Science, Ningbo University, Ningbo, China.
Zhonghua WangSchool of Marine Science, Ningbo University, Ningbo, China.
Dijun ZhangSchool of Marine Science, Ningbo University, Ningbo, China.
Jun ZhouSchool of Marine Science, Ningbo University, Ningbo, China.
Chenyang LuSchool of Marine Science, Ningbo University, Ningbo, China.
Xiurong SuSchool of Marine Science, Ningbo University, Ningbo, China. suxiurong_public@163.com.
Dewen DingSchool of Marine Science, Ningbo University, Ningbo, China. dingdewen@nbu.edu.cn.
Ningbo University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vibrio bacteria live in both marine and freshwater habitats and are associated with aquatic animals. Vibrio vulnificus is a pathogenic bacterium that infects people and livestock. It is usually found in offshore waters or within fish and shellfish. This study presents a comparative proteomic analysis of the outer membrane protein (OMP) changes in V. vulnificus proteins after stimulation with sewage from sewage drains. Using two-dimensional electrophoresis followed by MALDI-TOF MS/MS, 32 protein spots with significant differences in abundance were identified and characterized. These identified proteins were found to be involved in various functional categories, including catalysis, transport, membrane proteins progresses, receptor activity, energy metabolism, cytokine activity, and protein metabolism. The mRNA expression levels of 12 differential proteins were further assessed by qRT-PCR. Seven genes including carboxypeptidase, hemoglobin receptor, succinate dehydrogenase iron-sulfur subunit, ATP synthase subunit alpha, thioredoxin, succinyl-CoA synthetase subunit, and alanine dehydrogenase were downregulated upon stimulation, whereas the protein expression levels HupA receptor, type I secretion outer membrane protein, glutamine synthetase, superoxide dismutase, OmpU, and VuuA were upregulated.

Indexed as

AnimalsAquacultureFish DiseasesIronMetabolomicsProteomicsProton Magnetic Resonance SpectroscopySewageSuccinate DehydrogenaseTandem Mass SpectrometryVibrioVibrio vulnificusVirulenceIronSewageSuccinate Dehydrogenase1H NMRMetabolomicsProteomicsqRT-PCRSewageVibrio vulnificus

Identifiers

PMID28864971
OpenAlexW2750821447

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.