Evidence map›Paper›PMID 28861736›Full record

ArticleRice (New York, N.Y.)2017

Identification and fine mapping of a new gene, BPH31 conferring resistance to brown planthopper biotype 4 of India to improve rice, Oryza sativa L.

G D Prahalada, N Shivakumar, H C Lohithaswa, D K Sidde Gowda, G Ramkumar, Sung-Ryul Kim, C Ramachandra, Shailaja Hittalmani, Trilochan Mohapatra, Kshirod K Jena

Open access · goldAbstract read
In one paragraph

Article in Rice (New York, N.Y.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
11.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 72 citations in OpenAlex.

  1. Review
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  5. Current status of molecular rice breeding for durable and broad-spectrum resistance to major diseases and insect pests.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
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  13. Molecular mechanisms, genetic mapping, and genome editing for insect pest resistance in field crops.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

G D PrahaladaPlant Breeding Division, International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines.
N ShivakumarZonal Agricultural Research Station, VC Farm, Mandya, Karnataka, India.
H C LohithaswaCollege of Agriculture, Mandya, Karnataka, India.
D K Sidde GowdaCollege of Agriculture, Mandya, Karnataka, India.
G RamkumarPlant Breeding Division, International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines.
Sung-Ryul KimPlant Breeding Division, International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines.
C RamachandraZonal Agricultural Research Station, VC Farm, Mandya, Karnataka, India.
Shailaja HittalmaniUniversity of Agricultural Sciences, GKVK, Bangalore, Karnataka, India.
Trilochan MohapatraIndian Council of Agricultural Research, New Delhi, India.
Kshirod K JenaPlant Breeding Division, International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines. k.jena@irri.org.ORCID http://orcid.org/0000-0003-1377-4040
International Rice Research Institute · PHIndian Council of Agricultural Research · INUniversity of Agricultural Sciences, Bangalore · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRice (Oryza sativa L.) is the staple food for more than 3.5 billion people, mainly in Asia. Brown planthopper (BPH) is one of the most destructive insect pests of rice that limits rice production. Host-plant resistance is one of the most efficient ways to overcome BPH damage to the rice crop.

resultsBPH bioassay studies from 2009 to 2015 conducted in India and at the International Rice Research Institute (IRRI), Philippines, revealed that the cultivar CR2711-76 developed at the National Rice Research Institute (NRRI), Cuttack, India, showed stable and broad-spectrum resistance to several BPH populations of the Philippines and BPH biotype 4 of India. Genetic analysis and fine mapping confirmed the presence of a single dominant gene, BPH31, in CR2711-76 conferring BPH resistance. The BPH31 gene was located on the long arm of chromosome 3 within an interval of 475 kb between the markers PA26 and RM2334. Bioassay analysis of the BPH31 gene in CR2711-76 was carried out against BPH populations of the Philippines. The results from bioassay revealed that CR2711-76 possesses three different mechanisms of resistance: antibiosis, antixenosis, and tolerance. The effectiveness of flanking markers was tested in a segregating population and the InDel type markers PA26 and RM2334 showed high co-segregation with the resistance phenotype. Foreground and background analysis by tightly linked markers as well as using the Infinium 6 K SNP chip respectively were applied for transferring the BPH31 gene into an indica variety, Jaya. The improved BPH31-derived Jaya lines showed strong resistance to BPH biotypes of India and the Philippines.

conclusionThe new BPH31 gene can be used in BPH resistance breeding programs on the Indian subcontinent. The tightly linked DNA markers identified in the study have proved their effectiveness and can be utilized in BPH resistance breeding in rice.

Indexed as

BPH31Host-plant resistanceInDel markerMarker-assisted selectionResistance mechanism

Identifiers

PMID28861736
PMCPMC5578944
OpenAlexW2751379653

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.