Evidence map›Paper›PMID 28859372›Full record

ArticleJournal of experimental botany2017

On the stability of nucleoside diphosphate glucose metabolites: implications for studies of plant carbohydrate metabolism.

Benjamin L Hill, Carlos M Figueroa, Matías D Asencion Diez, John E Lunn, Alberto A Iglesias, Miguel A Ballicora

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Nucleotide Sugars in Chemistry and Biology.Molecules (Basel, Switzerland) · 2020
    Review
  3. Immobilization of the Highly Active UDP-Glucose Pyrophosphorylase FromFrontiers in bioengineering and biotechnology · 2020
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Benjamin L HillDepartment of Chemistry and Biochemistry, Loyola University Chicago, 1068 West Sheridan Road, 60660 Chicago, IL, USA.
Carlos M FigueroaInstituto de Agrobiotecnología del Litoral, UNL, CONICET, FBCB, Colectora Ruta Nacional 168 km 0, 3000 Santa Fe, Argentina.
Matías D Asencion DiezInstituto de Agrobiotecnología del Litoral, UNL, CONICET, FBCB, Colectora Ruta Nacional 168 km 0, 3000 Santa Fe, Argentina.
John E LunnMax Planck Institute of Molecular Plant Physiology, Am Muehlenberg 1, D-14476 Potsdam-Golm, Germany.
Alberto A IglesiasInstituto de Agrobiotecnología del Litoral, UNL, CONICET, FBCB, Colectora Ruta Nacional 168 km 0, 3000 Santa Fe, Argentina.
Miguel A BallicoraDepartment of Chemistry and Biochemistry, Loyola University Chicago, 1068 West Sheridan Road, 60660 Chicago, IL, USA.
Instituto de Agrobiotecnología del Litoral · ARLoyola University Chicago · USMax Planck Institute of Molecular Plant Physiology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleoside diphosphate sugars (NDP-sugars) are the substrates for biosynthesis of oligo- and polysaccharides, such as starch and cellulose, and are also required for biosynthesis of nucleotides, ascorbic acid, several cofactors, glycoproteins and many secondary metabolites. A controversial study that questions the generally accepted pathway of ADP-glucose and starch synthesis in plants is based, in part, on claims that NDP-sugars are unstable at alkaline pH in the presence of Mg2+ and that this instability can lead to unreliable results from in vitro assays of enzyme activities. If substantiated, this claim would have far-reaching implications for many published studies that report on the activities of NDP-sugar metabolizing enzymes. To resolve this controversy, we investigated the stability of UDP- and ADP-glucose using biophysical, namely nuclear magnetic resonance (NMR), and highly specific enzymatic methods. Results obtained with both techniques indicate that NDP-sugars are not as unstable as previously suggested. Moreover, their calculated in vitro half-lives are significantly higher than estimates of their in planta turnover times. This indicates that the physico-chemical stability of NDP-sugars has little impact on their concentrations in vivo and that NDP-sugar levels are determined primarily by the relative rates of enzymatic synthesis and consumption. Our results refute one of the main arguments for the controversial pathway of starch synthesis from imported ADP-glucose produced by sucrose synthase in the cytosol.

Indexed as

Carbohydrate MetabolismHydrogen-Ion ConcentrationNucleoside Diphosphate SugarsPlantsNucleoside Diphosphate SugarsADP-glucoseNMRplastidstarchsucroseUDP-glucose

Identifiers

PMID28859372
PMCPMC5853320
OpenAlexW2626021850

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.