Evidence map›Paper›PMID 28855917›Full record

ArticleThe journal of venomous animals and toxins including tropical diseases2017

Peptidomic analysis of the venom of the solitary bee

Kohei Kazuma, Kenji Ando, Ken-Ichi Nihei, Xiaoyu Wang, Marisa Rangel, Marcia Regina Franzolin, Kanami Mori-Yasumoto, Setsuko Sekita, Makoto Kadowaki, Motoyoshi Satake and 1 more

Open access · goldAbstract read
In one paragraph

Article in The journal of venomous animals and toxins including tropical diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Kohei KazumaInstitute of Natural Medicine, University of Toyama, 2630 Sugitani, Toyama, 930-0194 Japan.
Kenji AndoInstitute of Natural Medicine, University of Toyama, 2630 Sugitani, Toyama, 930-0194 Japan.
Ken-Ichi NiheiFaculty of Agriculture, Utsunomiya University, Utsunomiya, Tochigi Japan.
Xiaoyu WangInstitute of Natural Medicine, University of Toyama, 2630 Sugitani, Toyama, 930-0194 Japan.
Marisa RangelImmunopathology Laboratory, Butantan Institute, Sao Paulo, SP Brazil.
Marcia Regina FranzolinBacteriology Laboratory, Butantan Institute, Sao Paulo, SP Brazil.
Kanami Mori-YasumotoFaculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University, Sanuki, Kagawa Japan.
Setsuko SekitaFaculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University, Sanuki, Kagawa Japan.
Makoto KadowakiInstitute of Natural Medicine, University of Toyama, 2630 Sugitani, Toyama, 930-0194 Japan.
Motoyoshi SatakeLaboratory of Plant Resources for Medicine, Showa Pharmaceutical University, Machidashi, Tokyo Japan.
Katsuhiro KonnoInstitute of Natural Medicine, University of Toyama, 2630 Sugitani, Toyama, 930-0194 Japan.
University of Toyama · JPInstituto Butantan · BRTokushima Bunri University · JPShowa Pharmaceutical University · JPUtsunomiya University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAmong the hymenopteran insect venoms, those from social wasps and bees - such as honeybee, hornets and paper wasps - have been well documented. Their venoms are composed of a number of peptides and proteins and used for defending their nests and themselves from predators. In contrast, the venoms of solitary wasps and bees have not been the object of further research. In case of solitary bees, only major peptide components in a few venoms have been addressed. Therefore, the aim of the present study was to explore the peptide component profile of the venom from the solitary bee

methodsA reverse-phase HPLC connected to ESI-OrbiTrap MS was used for LC-MS. On-line mass fingerprinting was made from TIC, and data-dependent tandem mass spectrometry gave MSMS spectra. A major peptide component was isolated by reverse-phase HPLC by conventional way, and its sequence was determined by Edman degradation, which was finally corroborated by solid phase synthesis. Using the synthetic specimen, biological activities (antimicrobial activity, mast cell devaluation, hemolysis, leishmanicidal activity) and pore formation in artificial lipid bilayer were evaluated.

resultsOn-line mass fingerprinting revealed that the crude venom contained 124 components. MS/MS analysis gave 75 full sequences of the peptide components. Most of these are related to the major and novel peptide, xylopin. Its sequence, GFVALLKKLPLILKHLH-NH

conclusionsLC-ESI-MS and MS/MS analysis of the crude venom extract from a solitary bee

Indexed as

LC-ESI-MSLinear cationic α-helical peptidePeptidomic analysisSolitary beeVenom

Identifiers

PMID28855917
PMCPMC5575948
OpenAlexW2750615587

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.