ArticleScientific reports2017
Transcriptomics analysis of salt stress tolerance in the roots of the mangrove Avicennia officinalis.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed.
- Artificial intelligence in plant salt stress research: from predictive models to multi-omics integration.Journal of experimental botany · 2026Review
- The Evolution of Gene Expression Plasticity During Adaptation to Salt in Chlamydomonas reinhardtii.Genome biology and evolution · 2024Article
- The translocation of a chloride channel from the Golgi to the plasma membrane helps plants adapt to salt stress.Nature communications · 2024Article
- Streptomyces alleviate abiotic stress in plant by producing pteridic acids.Nature communications · 2023Article
- A de novo reference assembly of the yellow mangrove Ceriops zippeliana genome.G3 (Bethesda, Md.) · 2022Article
- De Novo Reference Assembly of the Upriver Orange Mangrove (Bruguiera sexangula) Genome.Genome biology and evolution · 2022Article
- How salt stress-responsive proteins regulate plant adaptation to saline conditions.Plant molecular biology · 2022Review
- Transcriptome Analysis of Salt Stress inInternational journal of molecular sciences · 2021Article
- Overexpression of a Novel ERF-X-Type Transcription Factor, OsERF106MZ, Reduces Shoot Growth and Tolerance to Salinity Stress in Rice.Rice (New York, N.Y.) · 2021Article
- Transcriptome analysis ofPeerJ · 2021Article
- Regulation of a Cytochrome P450 GenePlant physiology · 2020Article
- How a Mangrove Tree Can Help to Improve the Salt Tolerance of Arabidopsis and Rice.Plant physiology · 2020Article
- Understanding salt tolerance mechanism using transcriptome profiling and de novo assembly of wild tomato Solanum chilense.Scientific reports · 2020Article
- Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots.Proceedings of the National Academy of Sciences of the United States of America · 2020Article
- Regulation ofFrontiers in plant science · 2020Article
- Local adaptation of a dominant coastal tree to freshwater availability and solar radiation suggested by genomic and ecophysiological approaches.Scientific reports · 2019Article
- Nitric oxide modulating ion balance in Hylotelephium erythrostictum roots subjected to NaCl stress based on the analysis of transcriptome, fluorescence, and ion fluxes.Scientific reports · 2019Article
- Transcriptome sequencing and functional analysis of Sedum lineare Thunb. upon salt stress.Molecular genetics and genomics : MGG · 2019Article
- Article
- Expression of AoNHX1 increases salt tolerance of rice and Arabidopsis, and bHLH transcription factors regulate AtNHX1 and AtNHX6 in Arabidopsis.Plant cell reports · 2019Article
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9 authors.
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Abstract
Salinity affects growth and development of plants, but mangroves exhibit exceptional salt tolerance. With direct exposure to salinity, mangrove roots possess specific adaptations to tolerate salt stress. Therefore, studying the early effects of salt on mangrove roots can help us better understand the tolerance mechanisms. Using two-month-old greenhouse-grown seedlings of the mangrove tree Avicennia officinalis subjected to NaCl treatment, we profiled gene expression changes in the roots by RNA-sequencing. Of the 6547 genes that were differentially regulated in response to salt treatment, 1404 and 5213 genes were significantly up- and down-regulated, respectively. By comparative genomics, 93 key salt tolerance-related genes were identified of which 47 were up-regulated. Upon placing all the differentially expressed genes (DEG) in known signaling pathways, it was evident that most of the DEGs involved in ethylene and auxin signaling were up-regulated while those involved in ABA signaling were down-regulated. These results imply that ABA-independent signaling pathways also play a major role in salt tolerance of A. officinalis. Further, ethylene response factors (ERFs) were abundantly expressed upon salt treatment and the Arabidopsis mutant aterf115, a homolog of AoERF114 is characterized. Overall, our results would help in understanding the possible molecular mechanism underlying salt tolerance in plants.
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