Evidence map›Paper›PMID 28855622›Full record

ArticleScientific reports2017

Multiple origins of endosymbionts in Chlorellaceae with no reductive effects on the plastid or mitochondrial genomes.

Weishu Fan, Wenhu Guo, James L Van Etten, Jeffrey P Mower

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Genetic Diversity of Symbiotic Green Algae ofPlants (Basel, Switzerland) · 2021
    Article
  7. Mitochondrial genome of the Antarctic microalgaMitochondrial DNA. Part B, Resources · 2021
    Article
  8. Article
  9. Article
  10. Complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2020
    Article
  11. Complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2020
    Article
  12. Complete chloroplast ofMitochondrial DNA. Part B, Resources · 2019
    Article
  13. Complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2019
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Weishu FanCenter for Plant Science Innovation, University of Nebraska, Lincoln, NE, 68588, USA.
Wenhu GuoWuhan Frasergen Bioinformatics Co. Ltd., Wuhan, Hubei, 430075, China.
James L Van EttenDepartment of Plant Pathology and Nebraska Center for Virology, University of Nebraska, Lincoln, NE, 68583, USA.
Jeffrey P MowerCenter for Plant Science Innovation, University of Nebraska, Lincoln, NE, 68588, USA. jpmower@unl.edu.
University of Nebraska–Lincoln · US

Funding

Nebraska Center for VirologyP30GM103509 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI WOOD, CHARLES · 2012 to 2014
$3.3M
NIGMS NIH HHS P30 GM103509
6 · The paper itself

Abstract

Ancient endosymbiotic relationships have led to extreme genomic reduction in many bacterial and eukaryotic algal endosymbionts. Endosymbionts in more recent and/or facultative relationships can also experience genomic reduction to a lesser extent, but little is known about the effects of the endosymbiotic transition on the organellar genomes of eukaryotes. To understand how the endosymbiotic lifestyle has affected the organellar genomes of photosynthetic green algae, we generated the complete plastid genome (plastome) and mitochondrial genome (mitogenome) sequences from three green algal endosymbionts (Chlorella heliozoae, Chlorella variabilis and Micractinium conductrix). The mitogenomes and plastomes of the three newly sequenced endosymbionts have a standard set of genes compared with free-living trebouxiophytes, providing no evidence for functional genomic reduction. Instead, their organellar genomes are generally larger and more intron rich. Intron content is highly variable among the members of Chlorella, suggesting very high rates of gain and/or loss of introns during evolution. Phylogenetic analysis of plastid and mitochondrial genes demonstrated that the three endosymbionts do not form a monophyletic group, indicating that the endosymbiotic lifestyle has evolved multiple times in Chlorellaceae. In addition, M. conductrix is deeply nested within the Chlorella clade, suggesting that taxonomic revision is needed for one or both genera.

Indexed as

Genome, MitochondrialGenome, PlastidChlorellaChlorophytaEvolution, MolecularIntronsPhylogenySymbiosis

Identifiers

PMID28855622
PMCPMC5577192
OpenAlexW2746244378

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.