Evidence map›Paper›PMID 28854636›Full record

ArticleGenome biology and evolution2017

Variation in DNA Methylation Is Not Consistently Reflected by Sociality in Hymenoptera.

Karl M Glastad, Samuel V Arsenault, Kim L Vertacnik, Scott M Geib, Sasha Kay, Bryan N Danforth, Sandra M Rehan, Catherine R Linnen, Sarah D Kocher, Brendan G Hunt

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Article
  3. The Molecular Substrates of Insect Eusociality.Annual review of genetics · 2024
    Review
  4. Article
  5. Article
  6. Article
  7. A molecular toolkit for superorganisms.Trends in genetics : TIG · 2021
    Review
  8. The role of epigenetics, particularly DNA methylation, in the evolution of caste in insect societies.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Review
  9. Article
  10. Article
  11. Intergenerational transfer of DNA methylation marks in the honey bee.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 1 country.

Karl M GlastadDepartment of Cell and Developmental Biology, University of Pennsylvania.
Samuel V ArsenaultDepartment of Entomology, University of Georgia.
Kim L VertacnikDepartment of Biology, University of Kentucky.
Scott M GeibU.S. Department of Agriculture-Agricultural Research Service (USDA-ARS), Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, Hilo, Hawaii.
Sasha KayDepartment of Entomology, University of Georgia.
Bryan N DanforthDepartment of Entomology, Cornell University.
Sandra M RehanDepartment of Biological Sciences, University of New Hampshire, Durham, New Hampshire.
Catherine R LinnenDepartment of Biology, University of Kentucky.
Sarah D KocherLewis-Sigler Institute for Integrative Genomics, Princeton University.
Brendan G HuntDepartment of Entomology, University of Georgia.
University of Georgia · USUniversity of Kentucky · USCornell University · USDaniel K. Inouye U.S. Pacific Basin Agricultural Research Center · USPrinceton University · USUniversity of New Hampshire · USUniversity of Pennsylvania · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Changes in gene regulation that underlie phenotypic evolution can be encoded directly in the DNA sequence or mediated by chromatin modifications such as DNA methylation. It has been hypothesized that the evolution of eusocial division of labor is associated with enhanced gene regulatory potential, which may include expansions in DNA methylation in the genomes of Hymenoptera (bees, ants, wasps, and sawflies). Recently, this hypothesis garnered support from analyses of a commonly used metric to estimate DNA methylation in silico, CpG content. Here, we test this hypothesis using direct, nucleotide-level measures of DNA methylation across nine species of Hymenoptera. In doing so, we generated new DNA methylomes for three species of interest, including one solitary and one facultatively eusocial halictid bee and a sawfly. We demonstrate that the strength of correlation between CpG content and DNA methylation varies widely among hymenopteran taxa, highlighting shortcomings in the utility of CpG content as a proxy for DNA methylation in comparative studies of taxa with sparse DNA methylomes. We observed strikingly high levels of DNA methylation in the sawfly relative to other investigated hymenopterans. Analyses of molecular evolution suggest the relatively distinct sawfly DNA methylome may be associated with positive selection on functional DNMT3 domains. Sawflies are an outgroup to all ants, bees, and wasps, and no sawfly species are eusocial. We find no evidence that either global expansions or variation within individual ortholog groups in DNA methylation are consistently associated with the evolution of social behavior.

Indexed as

DNA MethylationAnimalsBase CompositionBehavior, AnimalEvolution, MolecularHymenopteraPhylogenySequence Analysis, DNASocial BehaviorCpG o/eepigeneticseusocialityNeodiprion leconteisocial insectswhole genome bisulfite sequencing

Identifiers

PMID28854636
PMCPMC5522706
OpenAlexW2735382390

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.