Evidence map›Paper›PMID 28854224›Full record

ArticlePLoS pathogens2017

The 5'-poly(A) leader of poxvirus mRNA confers a translational advantage that can be achieved in cells with impaired cap-dependent translation.

Pragyesh Dhungel, Shuai Cao, Zhilong Yang

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
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  11. Article
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  13. Article
  14. Ribosomes in poxvirus infection.Current opinion in virology · 2022
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Why do poxviruses still matter?Cell & bioscience · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Pragyesh DhungelDivision of Biology, Kansas State University, Manhattan, Kansas, United States of America.
Shuai CaoDivision of Biology, Kansas State University, Manhattan, Kansas, United States of America.
Zhilong YangDivision of Biology, Kansas State University, Manhattan, Kansas, United States of America.ORCID http://orcid.org/0000-0001-8995-2654
Kansas State University · US

Funding

Synthetic Chemical Biology CoreP20GM113117 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI OROZCO, ROBIN C. · 2016 to 2025
$23.9M
Selective translation conferred by the poly(A) leader of vaccinia virus mRNAsR21AI128406 · NIAID · KANSAS STATE UNIVERSITY · PI YANG, ZHILONG · 2017 to 2018
$413k
NIAID NIH HHS R21 AI128406NIGMS NIH HHS P20 GM113117
6 · The paper itself

Abstract

The poly(A) leader at the 5'-untranslated region (5'-UTR) is an unusually striking feature of all poxvirus mRNAs transcribed after viral DNA replication (post-replicative mRNAs). These poly(A) leaders are non-templated and of heterogeneous lengths; and their function during poxvirus infection remains a long-standing question. Here, we discovered that a 5'-poly(A) leader conferred a selective translational advantage to mRNA in poxvirus-infected cells. A constitutive and uninterrupted 5'-poly(A) leader with 12 residues was optimal. Because the most frequent lengths of the 5'-poly(A) leaders are 8-12 residues, the result suggests that the poly(A) leader has been evolutionarily optimized to boost poxvirus protein production. A 5'-poly(A) leader also could increase protein production in the bacteriophage T7 promoter-based expression system of vaccinia virus, the prototypic member of poxviruses. Interestingly, although vaccinia virus post-replicative mRNAs do have 5'- methylated guanosine caps and can use cap-dependent translation, in vaccinia virus-infected cells, mRNA with a 5'-poly(A) leader could also be efficiently translated in cells with impaired cap-dependent translation. However, the translation was not mediated through an internal ribosome entry site (IRES). These results point to a fundamental mechanism poxvirus uses to efficiently translate its post-replicative mRNAs.

Indexed as

5' Untranslated RegionsBlotting, WesternCell LineGene Knockdown TechniquesHumansPolymerase Chain ReactionPoxviridae InfectionsProtein BiosynthesisRNA CapsRNA, MessengerRNA, ViralVaccinia virusVirus Replication5' Untranslated RegionsRNA CapsRNA, MessengerRNA, Viral

Identifiers

PMID28854224
PMCPMC5595341
OpenAlexW2752915315

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.