Evidence map›Paper›PMID 28854174›Full record

ArticleNature2017

Orthotopic patient-derived xenografts of paediatric solid tumours.

Elizabeth Stewart, Sara M Federico, Xiang Chen, Anang A Shelat, Cori Bradley, Brittney Gordon, Asa Karlstrom, Nathaniel R Twarog, Michael R Clay, Armita Bahrami and 15 more

Abstract read
In one paragraph

Article in Nature, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 205 papers.

0numbers the graph read from it
0cells of the map it votes in
205citing papers in PubMed
26.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

205 citing papers in PubMed, 300 citations in OpenAlex.

  1. Article
  2. Ewing Sarcoma PDX Models.Methods in molecular biology (Clifton, N.J.) · 2027
    Article
  3. Orthotopic Implants in Mice.Methods in molecular biology (Clifton, N.J.) · 2027
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Choosing the right animal model for sarcoma research.Cellular and molecular life sciences : CMLS · 2026
    Review
  19. Article
  20. Article

145 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors at 2 institutions in 1 country.

Elizabeth StewartDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Sara M FedericoDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Xiang ChenDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Anang A ShelatDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Cori BradleyDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Brittney GordonDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Asa KarlstromDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Nathaniel R TwarogDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Michael R ClayDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Armita BahramiDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Burgess B FreemanDepartment of the Preclinical Pharmacokinetics Shared Resource, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Beisi XuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Xin ZhouDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Jianrong WuDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Victoria HonnellDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Monica OcarzDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Kaley BlankenshipDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Jason DapperDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Elaine R MardisThe Genome Institute, Washington University School of Medicine in St. Louis, St. Louis, Missouri 63108, USA.
Richard K WilsonThe Genome Institute, Washington University School of Medicine in St. Louis, St. Louis, Missouri 63108, USA.
James DowningDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Jinghui ZhangDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
John EastonDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Alberto PappoDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Michael A DyerDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
St. Jude Children's Research Hospital · USWashington University in St. Louis · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
Proliferation Control in the Retina: The Rb FamilyR01EY014867 · NEI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI DYER, MICHAEL A · 2003 to 2012
$4.5M
Proliferation and Differentiation of Retinal Stem CellsR01EY018599 · NEI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI DYER, MICHAEL A · 2008 to 2011
$2.5M
Novel Therapeutic Approaches for the Treatment of RhabdomyosarcomaR01CA219686 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI DYER, MICHAEL A · 2017 to 2021
$2.0M
Molecular Targeted Therapy for RetinoblastomaR01CA168875 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI DYER, MICHAEL A · 2012 to 2016
$1.8M
Howard Hughes Medical InstituteNCI NIH HHS P30 CA021765NCI NIH HHS R01 CA168875NCI NIH HHS R01 CA219686NEI NIH HHS R01 EY014867NEI NIH HHS R01 EY018599
6 · The paper itself

Abstract

Paediatric solid tumours arise from endodermal, ectodermal, or mesodermal lineages. Although the overall survival of children with solid tumours is 75%, that of children with recurrent disease is below 30%. To capture the complexity and diversity of paediatric solid tumours and establish new models of recurrent disease, here we develop a protocol to produce orthotopic patient-derived xenografts at diagnosis, recurrence, and autopsy. Tumour specimens were received from 168 patients, and 67 orthotopic patient-derived xenografts were established for 12 types of cancer. The origins of the patient-derived xenograft tumours were reflected in their gene-expression profiles and epigenomes. Genomic profiling of the tumours, including detailed clonal analysis, was performed to determine whether the clonal population in the xenograft recapitulated the patient's tumour. We identified several drug vulnerabilities and showed that the combination of a WEE1 inhibitor (AZD1775), irinotecan, and vincristine can lead to complete response in multiple rhabdomyosarcoma orthotopic patient-derived xenografts tumours in vivo.

Indexed as

AnimalsBortezomibCamptothecinCell Cycle ProteinsChildClone CellsDrug Therapy, CombinationEpigenesis, GeneticFemaleHeterograftsHigh-Throughput Screening AssaysHumansHydroxamic AcidsIndolesIrinotecanMiceadavosertibBortezomibCamptothecinCell Cycle ProteinsHydroxamic AcidsIndolesIrinotecanNuclear ProteinsPanobinostatProtein-Tyrosine KinasesPyrazolesPyrimidinesPyrimidinonesVincristineWEE1 protein, human

Identifiers

PMID28854174
PMCPMC5659286
OpenAlexW2750663875

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.