Evidence map›Paper›PMID 28852133›Full record

ArticleScientific reports2017

A kinetic model of multiple phenotypic states for breast cancer cells.

Kang Qiu, Kai-Fu Gao, Li-Jian Yang, Zhao-Kang Zhang, Ran Wang, Hui-Shu Ma, Ya Jia

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Kang QiuInstitute of Biophysics and Department of Physics, Central China Normal University, Wuhan, 430079, China.
Kai-Fu GaoInstitute of Biophysics and Department of Physics, Central China Normal University, Wuhan, 430079, China.ORCID 0000-0001-7574-4870
Li-Jian YangInstitute of Biophysics and Department of Physics, Central China Normal University, Wuhan, 430079, China.
Zhao-Kang ZhangInstitute of Biophysics and Department of Physics, Central China Normal University, Wuhan, 430079, China.
Ran WangInstitute of Biophysics and Department of Physics, Central China Normal University, Wuhan, 430079, China.
Hui-Shu MaInstitute of Biophysics and Department of Physics, Central China Normal University, Wuhan, 430079, China.
Ya JiaInstitute of Biophysics and Department of Physics, Central China Normal University, Wuhan, 430079, China. jiay@phy.ccnu.edu.cn.
Central China Normal University · CNXuzhou Medical College · CN

Funding

VIRTUAL FCSP41RR013186 · NCRR · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI LOEW, LESLIE M · 1998 to 2011
$14.2M
NCRR NIH HHS P41 RR013186
6 · The paper itself

Abstract

Quantitative modeling of microscopic genes regulatory mechanisms in an individual cell is a crucial step towards understanding various macroscopic physiological phenomena of cell populations. Based on the regulatory mechanisms of genes zeb1 and cdh1 in the growth and development of breast cancer cells, we propose a kinetic model at the level of single cell. By constructing the effective landscape of underlying stationary probability for the genes expressions, it is found that (i) each breast cancer cell has three phenotypic states (i.e., the stem-like, basal, and luminal states) which correspond to three attractions of the probability landscape. (ii) The interconversions between phenotypic states can be induced by the noise intensity and the property of phenotypic switching is quantified by the mean first-passage time. (iii) Under certain conditions, the probabilities of each cancer cell appearing in the three states are consistent with the macroscopic phenotypic equilibrium proportions in the breast cancer SUM159 cell line. (iv) Our kinetic model involving the TGF-β signal can also qualitatively explain several macroscopic physiological phenomena of breast cancer cells, such as the "TGF-β paradox" in tumor therapy, the five clinical subtypes of breast cancer cells, and the effects of transient TGF-β on breast cancer metastasis.

Indexed as

Models, BiologicalPhenotypeAlgorithmsBreast NeoplasmsFemaleGene Expression Regulation, NeoplasticHumansKinetics

Identifiers

PMID28852133
PMCPMC5574983
OpenAlexW2748935293

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.