Evidence map›Paper›PMID 28852096›Full record

ArticleScientific reports2017

A multi-trap microfluidic chip enabling longitudinal studies of nerve regeneration in Caenorhabditis elegans.

Sertan Kutal Gokce, Evan Marley Hegarty, Sudip Mondal, Peisen Zhao, Navid Ghorashian, Massimo A Hilliard, Adela Ben-Yakar

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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  7. CDK14 Promotes Axon Regeneration by Regulating the Noncanonical Wnt Signaling Pathway in a Kinase-Independent Manner.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sertan Kutal GokceElectrical and Computer Engineering, The University of Texas at Austin, Austin, TX, 78712, USA.
Evan Marley HegartyMechanical Engineering, The University of Texas at Austin, Austin, TX, 78712, USA.
Sudip MondalMechanical Engineering, The University of Texas at Austin, Austin, TX, 78712, USA.ORCID 0000-0002-5387-0064
Peisen ZhaoElectrical and Computer Engineering, The University of Texas at Austin, Austin, TX, 78712, USA.
Navid GhorashianBiomedical Engineering, The University of Texas at Austin, Austin, TX, 78712, USA.
Massimo A HilliardQueensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
Adela Ben-YakarElectrical and Computer Engineering, The University of Texas at Austin, Austin, TX, 78712, USA. ben-yakar@mail.utexas.edu.

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
High-speed opto-fluidics to screen entire nervous system in aging and diseaseR01AG041135 · NIA · UNIVERSITY OF TEXAS AT AUSTIN · PI BEN-YAKAR, ADELA, PIERCE, JONATHAN THOMAS · 2011 to 2015
$2.8M
Microfluidic-microtiter interface for rapid large-scale screenings of C. elegansR21NS067340 · NINDS · UNIVERSITY OF TEXAS AT AUSTIN · PI BEN-YAKAR, ADELA · 2009 to 2010
$409k
Integrated Microfluidics for Nerve Regeneration Studies using Laser Nano-AxotomyR21NS058646 · NINDS · UNIVERSITY OF TEXAS AT AUSTIN · PI BEN-YAKAR, ADELA · 2007 to 2008
$353k
NIA NIH HHS R01 AG041135NIH HHS P40 OD010440NINDS NIH HHS R21 NS058646NINDS NIH HHS R21 NS067340
6 · The paper itself

Abstract

Several sophisticated microfluidic devices have recently been proposed for femtosecond laser axotomy in the nematode C. elegans for immobilization of the animals for surgery to overcome time-consuming and labor-intensive manual processes. However, nerve regeneration studies require long-term recovery of the animals and multiple imaging sessions to observe the regeneration capabilities of their axons post-injury. Here we present a simple, multi-trap device, consisting of a single PDMS (polydimethylsiloxane) layer, which can immobilize up to 20 animals at the favorable orientation for optical access needed for precise laser surgery and high-resolution imaging. The new device, named "worm hospital" allows us to perform the entire nerve regeneration studies, including on-chip axotomy, post-surgery housing for recovery, and post-recovery imaging all on one microfluidic chip. Utilizing the worm hospital and analysis of mutants, we observed that most but not all neurodevelopmental genes in the Wnt/Frizzled pathway are important for regeneration of the two touch receptor neurons ALM and PLM. Using our new chip, we observed that the cwn-2 and cfz-2 mutations significantly reduced the reconnection possibilities of both neurons without any significant reduction in the regrowth lengths of the severed axons. We observed a similar regeneration phenotype with cwn-1 mutation in ALM neurons only.

Indexed as

Microfluidic Analytical TechniquesMicrofluidicsNerve RegenerationAnimalsAxonsCaenorhabditis elegansCell PolarityFluorescent Antibody TechniqueNeurons

Identifiers

PMID28852096
PMCPMC5575036

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.