Evidence map›Paper›PMID 28851925›Full record

ArticleScientific reports2017

Genome-wide profiling of humoral immunity and pathogen genes under selection identifies immune evasion tactics of Chlamydia trachomatis during ocular infection.

Harry Pickering, Andy Teng, Nkoyo Faal, Hassan Joof, Pateh Makalo, Eunice Cassama, Meno Nabicassa, Anna R Last, Sarah E Burr, Sarah L Rowland-Jones and 7 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Pathogens (Basel, Switzerland) · 2026
    Article
  2. Transcriptional profiling ofFrontiers in cellular and infection microbiology · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Frontiers in immunology · 2020
    Article
  9. Chlamydial Infection From Outside to Inside.Frontiers in microbiology · 2019
    Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 3 countries.

Harry PickeringClinical Research Department, Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, United Kingdom. harry.pickering@lshtm.ac.uk.
Andy TengImmPORT Therapeutics, Inc./Antigen Discovery Inc., 1 Technology Dr., Suite E309, Irvine, CA, 92618, United States.
Nkoyo FaalDisease Control and Elimination Theme, Medical Research Council The Gambia Unit, Fajara, Banjul, The Gambia.
Hassan JoofDisease Control and Elimination Theme, Medical Research Council The Gambia Unit, Fajara, Banjul, The Gambia.
Pateh MakaloDisease Control and Elimination Theme, Medical Research Council The Gambia Unit, Fajara, Banjul, The Gambia.
Eunice CassamaPrograma Nacional de Saúde de Visão, Ministério de Saúde Publica, Bissau, Guinea-Bissau.
Meno NabicassaPrograma Nacional de Saúde de Visão, Ministério de Saúde Publica, Bissau, Guinea-Bissau.
Anna R LastClinical Research Department, Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, United Kingdom.
Sarah E BurrClinical Research Department, Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, United Kingdom.
Sarah L Rowland-JonesDisease Control and Elimination Theme, Medical Research Council The Gambia Unit, Fajara, Banjul, The Gambia.
Nicholas R ThomsonDepartment of Pathogen Molecular Biology, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, United Kingdom.
Chrissy H RobertsClinical Research Department, Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, United Kingdom.ORCID 0000-0003-1064-5980
David C W MabeyClinical Research Department, Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, United Kingdom.
Robin L BaileyClinical Research Department, Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, United Kingdom.
Richard D HaywardInstitute of Structural and Molecular Biology, Birkbeck & University College London, Malet Street, London, WC1E 7HX, United Kingdom.
Luis M de la MazaDepartment of Pathology and Laboratory Medicine, Medical Sciences I, Room D440, University of California, Irvine, CA, 92697-4800, United States.
Martin J HollandClinical Research Department, Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, United Kingdom.ORCID 0000-0002-5828-6318
University of London · GBMRC Unit the Gambia · GMAntigen Discovery (United States) · USInstitute of Structural and Molecular Biology · GBUniversity of California, Irvine · US

Funding

Medical Research Council MC_U190085854Wellcome Trust 097330/Z/11/Z
6 · The paper itself

Abstract

The frequency and duration of Chlamydia trachomatis (Ct) ocular infections decrease with age, suggesting development of partial immunity. However, there is a lack of clear correlates of immunity to Ct infection in humans. We screened sera from a cohort of Gambian children followed for six-months against a Ct-proteome microarray. At genome sequence level, we detected signatures of selection from a population of ocular Ct isolates from Guinea-Bissau. Together these approaches allowed us to highlight the focus of humoral responses and hypothesise new modes of pathogen immune evasion. Children who were susceptible to frequent and/or prolonged Ct infection had a less focussed antibody response, including preferential recognition of forty-two antigens. There was evidence of positive and purifying selection across the genome, but little balancing selection. In contrast, most antigens that were associated with susceptibility were under neutral selection. These data suggest an evasion strategy in which Ct presents a large panel of irrelevant antigens to the immune system to block or misdirect protective responses. Development of a focused immune response, possibly induced through vaccination, may be an effective strategy to promote protection to Ct infection.

Indexed as

Host-Pathogen InteractionsImmune EvasionImmunity, HumoralSelection, GeneticAntigens, BacterialChildChild, PreschoolChlamydia trachomatisFemaleGambiaGuinea-BissauHumansMaleTrachomaAntigens, Bacterial

Identifiers

PMID28851925
PMCPMC5575166
OpenAlexW2747828068

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.