Evidence map›Paper›PMID 28851890›Full record

ArticleScientific reports2017

Effect of fluoride treatment on gene expression in tea plant (Camellia sinensis).

Qing-Sheng Li, Xiao-Ming Lin, Ru-Ying Qiao, Xin-Qiang Zheng, Jian-Liang Lu, Jian-Hui Ye, Yue-Rong Liang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Qing-Sheng LiTea Research Institute, Zhejiang University, Hangzhou, 310058, China.
Xiao-Ming LinTea Research Institute, Zhejiang University, Hangzhou, 310058, China.
Ru-Ying QiaoTea Research Institute, Zhejiang University, Hangzhou, 310058, China.
Xin-Qiang ZhengTea Research Institute, Zhejiang University, Hangzhou, 310058, China.
Jian-Liang LuTea Research Institute, Zhejiang University, Hangzhou, 310058, China.
Jian-Hui YeTea Research Institute, Zhejiang University, Hangzhou, 310058, China. jianhuiye@zju.edu.cn.
Yue-Rong LiangTea Research Institute, Zhejiang University, Hangzhou, 310058, China. yrliang@zju.edu.cn.
Zhejiang University · CNTea Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tea plant is a typical fluorine (F) accumulator. F concentration in mature tea leaves is several hundred times higher than that in normal field crops. Long-term consumption of teas with high level F will increase the risks of dental and skeletal fluorosis. The mechanism of F accumulation in tea stands unclear. RNA-Seq and digital gene expression (DGE) techniques were used to investigate the effect of F on the differential expressions of transcriptome in tea plant. The results showed that F content in mature tea leaves was increased with increase in F concentration of cultural solution and duration of F treatment time. Based on comparison with data of GO, COG, KEGG and Nr databases, 144 differentially expressed unigenes with definite annotation were identified. Real-time reverse transcription PCR (qRT-PCR) was used to validate the effect of F on expression of 5 unigenes screened from the 144 unigenes. F treatment induced the expression of defense genes such as receptor-like kinases (RLKs) and U-box domain-containing protein. Based on the present study, F uptake is considered to be related to calcium-transporting ATPase, especially autoinhibited Ca

Indexed as

Camellia sinensisComputational BiologyFluoridesGene Expression ProfilingGene Expression Regulation, PlantGene OntologyHigh-Throughput Nucleotide SequencingMolecular Sequence AnnotationPlant LeavesReproducibility of ResultsTeaTranscriptomeFluoridesTea

Identifiers

PMID28851890
PMCPMC5575122
OpenAlexW2750050593

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.