Evidence map›Paper›PMID 28851882›Full record

ArticleNature communications2017

Poliovirus intrahost evolution is required to overcome tissue-specific innate immune responses.

Yinghong Xiao, Patrick Timothy Dolan, Elizabeth Faul Goldstein, Min Li, Mikhail Farkov, Leonid Brodsky, Raul Andino

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 95 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The potential impacts of human genetics on virus emergence.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
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  10. Article
  11. The role of indels in evolution and pathogenicity of RNA viruses.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. High-resolution mapping reveals the mechanism and contribution of genome insertions and deletions to RNA virus evolution.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Recombination in Positive-Strand RNA Viruses.Frontiers in microbiology · 2022
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Yinghong XiaoDepartment of Microbiology and Immunology, University of California, San Francisco, CA, 94158, USA.
Patrick Timothy DolanDepartment of Microbiology and Immunology, University of California, San Francisco, CA, 94158, USA.
Elizabeth Faul GoldsteinDepartment of Microbiology and Immunology, University of California, San Francisco, CA, 94158, USA.
Min LiDepartment of Microbiology and Immunology, University of California, San Francisco, CA, 94158, USA.
Mikhail FarkovTauber Bioinformatics Research Center and Department of Evolutionary & Environmental Biology, University of Haifa, Mount Carmel, Haifa, 31905, Israel.
Leonid BrodskyTauber Bioinformatics Research Center and Department of Evolutionary & Environmental Biology, University of Haifa, Mount Carmel, Haifa, 31905, Israel.
Raul AndinoDepartment of Microbiology and Immunology, University of California, San Francisco, CA, 94158, USA. raul.andino@ucsf.edu.
University of California, San Francisco · USUniversity of Haifa · IL

Funding

Unbiased Functional Characterization of Enterovirus-Host InteractionsP01AI091575 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KROGAN, NEVAN J · 2011 to 2015
$10.5M
RNA PROTEIN INTERACTIONS IN POLIOVIRUS REPLICATIONR01AI040085 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ANDINO, RAUL · 1998 to 2019
$5.8M
RECOMBINANT PICORNAVIRUSES AS AIDS VACCINESR01AI036178 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ANDINO, RAUL · 1994 to 2011
$3.6M
The Role of Cellular Chaperones in RNA Virus InfectionF32GM113483 · NIGMS · STANFORD UNIVERSITY · PI DOLAN, PATRICK TIMOTHY · 2015 to 2017
$162k
NIAID NIH HHS P01 AI091575NIAID NIH HHS R01 AI036178NIAID NIH HHS R01 AI040085NIGMS NIH HHS F32 GM113483NIH HHS GM113483-01NIH HHS R01 A140085NIH HHS R01 AI36178
6 · The paper itself

Abstract

RNA viruses, such as poliovirus, have a great evolutionary capacity, allowing them to quickly adapt and overcome challenges encountered during infection. Here we show that poliovirus infection in immune-competent mice requires adaptation to tissue-specific innate immune microenvironments. The ability of the virus to establish robust infection and virulence correlates with its evolutionary capacity. We further identify a region in the multi-functional poliovirus protein 2B as a hotspot for the accumulation of minor alleles that facilitate a more effective suppression of the interferon response. We propose that population genetic dynamics enables poliovirus spread between tissues through optimization of the genetic composition of low frequency variants, which together cooperate to circumvent tissue-specific challenges. Thus, intrahost virus evolution determines pathogenesis, allowing a dynamic regulation of viral functions required to overcome barriers to infection.RNA viruses, such as polioviruses, have a great evolutionary capacity and can adapt quickly during infection. Here, the authors show that poliovirus infection in mice requires adaptation to innate immune microenvironments encountered in different tissues.

Indexed as

AnimalsAntiviral AgentsCell LineCell Line, TumorChlorocebus aethiopsCOS CellsEvolution, MolecularGene Expression ProfilingHeLa CellsHost-Pathogen InteractionsHumansImmunity, InnateInterferonsMice, KnockoutMice, TransgenicMutation2B protein, poliovirusAntiviral AgentsInterferonsViral Nonstructural Proteins

Identifiers

PMID28851882
PMCPMC5575128
OpenAlexW2747023546

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.