Evidence map›Paper›PMID 28851267›Full record

ArticleBMC genomics2017

Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia.

Viswanathan Natarajan, Alison W Ha, Yangbasai Dong, Narsa M Reddy, David L Ebenezer, Prasad Kanteti, Sekhar P Reddy, J Usha Raj, Zhengdeng Lei, Mark Maienschein-Cline and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Interactive and independent effects of early lipopolysaccharide and hyperoxia exposure on developing murine lungs.American journal of physiology. Lung cellular and molecular physiology · 2020
    Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Viswanathan NatarajanDepartments of Medicine, University of Illinois, Chicago, IL, 60612, USA.
Alison W HaDepartments of Medicine, University of Illinois, Chicago, IL, 60612, USA.
Yangbasai DongDepartments of Medicine, University of Illinois, Chicago, IL, 60612, USA.
Narsa M ReddyDepartment of Pharmacology, University of Illinois, Chicago, IL, 60612, USA.
David L EbenezerDepartment of Biochemistry and Molecular genetics, University of Illinois, Chicago, IL, 60612, USA.
Prasad KantetiDepartment of Pharmacology, University of Illinois, Chicago, IL, 60612, USA.
Sekhar P ReddyDepartments of Medicine, University of Illinois, Chicago, IL, 60612, USA.
J Usha RajDepartments of Medicine, University of Illinois, Chicago, IL, 60612, USA.
Zhengdeng LeiDepartment of Center for Research Informatics, University of Illinois at Chicago, Chicago, IL, 60612, USA.
Mark Maienschein-ClineDepartment of Center for Research Informatics, University of Illinois at Chicago, Chicago, IL, 60612, USA.
Zarema ArbievaDepartment of CoreGenomics Facility, University of Illinois, Chicago, IL, 60612, USA.
Anantha HarijithDepartment of Pharmacology, University of Illinois, Chicago, IL, 60612, USA. harijith@uic.edu.ORCID http://orcid.org/0000-0002-4868-3862
University of Illinois Chicago · US

Funding

TRAINING PROGRAM IN LUNG BIOLOGY AND PATHOBIOLOGYT32HL007829 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI DOLLY MEHTA · 1995 to 2026
$15.6M
Therapeutic Potential of FTY720 Analogues in Lung InjuryP01HL098050 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI NATARAJAN, VISWANATHAN · 2011 to 2015
$10.9M
Center for Clinical and Translational ScienceUL1TR000050 · NCATS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI AZAR, DIMITRI T, MERMELSTEIN, ROBIN J. · 2012 to 2014
$9.8M
NCATS NIH HHS UL1 TR000050NHLBI NIH HHS P01 HL098050NHLBI NIH HHS T32 HL007829
6 · The paper itself

Abstract

backgroundSphingosine- 1-Phosphate (S1P) is a bioactive lipid and an intracellular as well as an extracellular signaling molecule. S1P ligand specifically binds to five related cell surface G-protein-coupled receptors (S1P

resultsTwo-way ANOVA analysis was performed and differentially expressed genes under hyperoxia were identified using Sphk1

conclusionUsing SphK1 knockout mice and differential gene expression analysis, we have shown here that S1P/SphK1 signaling plays a key role in promoting hyperoxia induced DNA damage, inflammation, apoptosis and ECM remodeling in neonatal lungs. It also appears to suppress pro-survival cellular responses involved in normal lung development. We therefore propose SphK1 as a therapeutic target for the development drugs to combat BPD.

Indexed as

Gene Expression ProfilingAnimalsAnimals, NewbornApoptosisBronchopulmonary DysplasiaCell CycleDisease Models, AnimalGene DeletionHumansHyperoxiaLysophospholipidsMiceMolecular Targeted TherapyOligonucleotide Array Sequence AnalysisPhosphotransferases (Alcohol Group Acceptor)Signal TransductionLysophospholipidsPhosphotransferases (Alcohol Group Acceptor)Sphingosinesphingosine 1-phosphateSphingosine KinaseLipid signalingNeonatal lung injuryOxidative stressSphingosine 1 phosphateSphingosine kinase 1

Identifiers

PMID28851267
PMCPMC5576338
OpenAlexW2751804723

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.