Evidence map›Paper›PMID 28850002›Full record

ReviewRNA biology2018

The role of intracellular compartmentalization on tRNA processing and modification.

Alan C Kessler, Gabriel Silveira d'Almeida, Juan D Alfonzo

Open access · bronzeAbstract readReview
In one paragraph

Review in RNA biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Therapeutic promise of engineered nonsense suppressor tRNAs.Wiley interdisciplinary reviews. RNA · 2021
    Review
  8. Article
  9. From canonical to modified nucleotides: balancing translation and metabolism.Critical reviews in biochemistry and molecular biology · 2020
    Review
  10. Article
  11. Article
  12. Article
  13. tRNA Metabolism and Neurodevelopmental Disorders.Annual review of genomics and human genetics · 2019
    Review
  14. Review
  15. Article
  16. Genes · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Alan C Kesslera Department of Microbiology , The Ohio State University , Columbus , Ohio , USA.
Gabriel Silveira d'Almeidaa Department of Microbiology , The Ohio State University , Columbus , Ohio , USA.
Juan D Alfonzoa Department of Microbiology , The Ohio State University , Columbus , Ohio , USA.
The Ohio State University · US

Funding

tRNA editing by deamination: Balancing affinity and specifictyR01GM084065 · NIGMS · OHIO STATE UNIVERSITY · PI ALFONZO, JUAN D · 2008 to 2021
$4.0M
The Mechanism of tRNA splicing in trypanosomesR56AI131248 · NIAID · OHIO STATE UNIVERSITY · PI ALFONZO, JUAN D · 2017 to 2017
$439k
NIAID NIH HHS R56 AI131248NIGMS NIH HHS R01 GM084065
6 · The paper itself

Abstract

A signature of most eukaryotic cells is the presence of intricate membrane systems. Intracellular organization presumably evolved to provide order, and add layers for regulation of intracellular processes; compartmentalization also forcibly led to the appearance of sophisticated transport systems. With nucleus-encoded tRNAs, it led to the uncoupling of tRNA synthesis from many of the maturation steps it undergoes. It is now clear that tRNAs are actively transported across intracellular membranes and at any point, in any compartment, they can be post-transcriptionally modified; modification enzymes themselves may localize to any of the genome-containing compartments. In the following pages, we describe a number of well-known examples of how intracellular compartmentalization of tRNA processing and modification activities impact the function and fate of tRNAs. We raise the possibility that rates of intracellular transport may influence the level of modification and as such increase the diversity of differentially modified tRNAs in cells.

Indexed as

RNA Processing, Post-TranscriptionalActive Transport, Cell NucleusCell CompartmentationCell NucleusCytosolHumansIntracellular MembranesMitochondriaNucleic Acid ConformationRNA, TransferSaccharomyces cerevisiaeTrypanosoma brucei bruceiRNA, TransferMaturationmodificationnuclear exportretrograde transporttRNA splicing

Identifiers

PMID28850002
PMCPMC6103688
OpenAlexW2753618916

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.