Evidence map›Paper›PMID 28848993›Full record

ArticleInternational journal of molecular medicine2017

Integrating microRNA and messenger RNA expression profiles in a rat model of deep vein thrombosis.

Qian-Qian Jin, Jun-Hong Sun, Qiu-Xiang Du, Xiao-Jun Lu, Xi-Yan Zhu, Hao-Liang Fan, Christian Hölscher, Ying-Yuan Wang

Open access · hybridAbstract read
In one paragraph

Article in International journal of molecular medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Depleted miR-125a-5p Causes Vascular Endothelial Cell Dysfunction in Deep Vein Thrombosis by Targeting Angiopoietin 2.Indian journal of hematology & blood transfusion : an official journal of Indian Society of Hematology and Blood Transfusion · 2023
    Article
  8. Article
  9. Article
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  11. Role of microRNAs in Hemophilia and Thrombosis in Humans.International journal of molecular sciences · 2020
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. LncRNA NEAT1 Promotes Vascular Endothelial Cell Dysfunction via miR-218-5p/GAB2 and Serves as a Diagnostic Biomarker for Deep Vein Thrombosis.Clinical and applied thrombosis/hemostasis : official journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Qian-Qian JinDepartment of Forensic Pathology, Shanxi Medical University, Taiyuan, Shanxi 030001, P.R. China.
Jun-Hong SunDepartment of Forensic Pathology, Shanxi Medical University, Taiyuan, Shanxi 030001, P.R. China.
Qiu-Xiang DuDepartment of Forensic Pathology, Shanxi Medical University, Taiyuan, Shanxi 030001, P.R. China.
Xiao-Jun LuDepartment of Forensic Pathology, Shanxi Medical University, Taiyuan, Shanxi 030001, P.R. China.
Xi-Yan ZhuDepartment of Forensic Pathology, Shanxi Medical University, Taiyuan, Shanxi 030001, P.R. China.
Hao-Liang FanDepartment of Forensic Pathology, Shanxi Medical University, Taiyuan, Shanxi 030001, P.R. China.
Christian HölscherBiochemical and Life Sciences, Lancaster University, Lancaster, Lancashire LA1 4YQ, UK.
Ying-Yuan WangDepartment of Forensic Pathology, Shanxi Medical University, Taiyuan, Shanxi 030001, P.R. China.
Shanxi Medical University · CNLancaster University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Deep vein thrombosis (DVT) is a disease involving multiple genes and systems. MicroRNAs (miRNAs) represent a class of non-coding small RNAs that post-transcriptionally suppress their target genes. The expression patterns of miRNA and messenger RNA (mRNA) in DVT remain poorly characterized. The aim of the present study was to evaluate miRNA and mRNA expression profiles in a stasis-induced DVT rat model. Male SD rats were randomly divided into three groups as follows: DVT, sham and control. The inferior vena cava (IVC) of rats was ligated to construct stasis-induced DVT models. Rats were sacrificed three days after ligation, and morphological changes in the vein tissues were observed by hematoxylin and eosin and Masson staining. The miRNA and mRNA expression profiles were evaluated by microarrays, followed by bioinformatics analysis. The microarray analysis identified 22 miRNAs and 487 mRNAs that were significantly differentially expressed between the experimental and control groups, and between the experimental and sham groups, but not between the control and sham groups (P≤0.05; ≥2.0‑fold change). By subsequent bioinformatics analysis, a 19 miRNA-98 mRNAs network was constructed in the stasis-induced DVT rat model. Notably, the majority of these miRNAs and mRNAs are reported to be expressed by endothelial cells (ECs) and are associated with the function of ECs. The results provide evidence indicating that the regulatory association of miRNA and mRNA points to key roles played by ECs in thrombosis. These findings advance our understanding of the molecular regulatory mechanisms underlying the pathophysiology of DVT.

Indexed as

Gene Regulatory NetworksAnimalsComputational BiologyDisease Models, AnimalEndothelial CellsGene Expression ProfilingGene Expression RegulationGene OntologyMaleMicroRNAsMolecular Sequence AnnotationRatsRats, Sprague-DawleyRNA, MessengerVena Cava, InferiorVenous ThrombosisMicroRNAsRNA, Messenger

Identifiers

PMID28848993
PMCPMC5593457
OpenAlexW2750415661

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.