Evidence map›Paper›PMID 28848398›Full record

ArticleFrontiers in cellular neuroscience2017

Microglia Morphological Categorization in a Rat Model of Neuroinflammation by Hierarchical Cluster and Principal Components Analysis.

María Del Mar Fernández-Arjona, Jesús M Grondona, Pablo Granados-Durán, Pedro Fernández-Llebrez, María D López-Ávalos

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular neuroscience, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 255 papers.

0numbers the graph read from it
0cells of the map it votes in
255citing papers in PubMed
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

255 citing papers in PubMed, 414 citations in OpenAlex.

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195 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

María Del Mar Fernández-ArjonaDepartamento de Biología Celular, Facultad de Ciencias, Genética y Fisiología, Instituto de Investigación Biomédica de Málaga (IBIMA), Universidad de MálagaMálaga, Spain.
Jesús M GrondonaDepartamento de Biología Celular, Facultad de Ciencias, Genética y Fisiología, Instituto de Investigación Biomédica de Málaga (IBIMA), Universidad de MálagaMálaga, Spain.
Pablo Granados-DuránDepartamento de Biología Celular, Facultad de Ciencias, Genética y Fisiología, Instituto de Investigación Biomédica de Málaga (IBIMA), Universidad de MálagaMálaga, Spain.
Pedro Fernández-LlebrezDepartamento de Biología Celular, Facultad de Ciencias, Genética y Fisiología, Instituto de Investigación Biomédica de Málaga (IBIMA), Universidad de MálagaMálaga, Spain.
María D López-ÁvalosDepartamento de Biología Celular, Facultad de Ciencias, Genética y Fisiología, Instituto de Investigación Biomédica de Málaga (IBIMA), Universidad de MálagaMálaga, Spain.
Instituto de Investigación Biomédica de Málaga · ESUniversidad de Málaga · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is known that microglia morphology and function are closely related, but only few studies have objectively described different morphological subtypes. To address this issue, morphological parameters of microglial cells were analyzed in a rat model of aseptic neuroinflammation. After the injection of a single dose of the enzyme neuraminidase (NA) within the lateral ventricle (LV) an acute inflammatory process occurs. Sections from NA-injected animals and sham controls were immunolabeled with the microglial marker IBA1, which highlights ramifications and features of the cell shape. Using images obtained by section scanning, individual microglial cells were sampled from various regions (septofimbrial nucleus, hippocampus and hypothalamus) at different times post-injection (2, 4 and 12 h). Each cell yielded a set of 15 morphological parameters by means of image analysis software. Five initial parameters (including fractal measures) were statistically different in cells from NA-injected rats (most of them IL-1β positive, i.e., M1-state) compared to those from control animals (none of them IL-1β positive, i.e., surveillant state). However, additional multimodal parameters were revealed more suitable for hierarchical cluster analysis (HCA). This method pointed out the classification of microglia population in four clusters. Furthermore, a linear discriminant analysis (LDA) suggested three specific parameters to objectively classify any microglia by a decision tree. In addition, a principal components analysis (PCA) revealed two extra valuable variables that allowed to further classifying microglia in a total of eight sub-clusters or types. The spatio-temporal distribution of these different morphotypes in our rat inflammation model allowed to relate specific morphotypes with microglial activation status and brain location. An objective method for microglia classification based on morphological parameters is proposed.

Indexed as

fractalmicrogliamorphofunctionalmorphometricneuraminidase

Identifiers

PMID28848398
PMCPMC5550745
OpenAlexW2742827847

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.