Evidence map›Paper›PMID 28846093›Full record

ArticleNature cell biology2017

Super-resolution microscopy reveals that disruption of ciliary transition-zone architecture causes Joubert syndrome.

Xiaoyu Shi, Galo Garcia, Julie C Van De Weghe, Ryan McGorty, Gregory J Pazour, Dan Doherty, Bo Huang, Jeremy F Reiter

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Nature cell biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 100 papers.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed
19.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 176 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. The kinesin-4 protein KIF27 forms a cytoskeletal scaffold at the transition zone to promote motile cilia structural integrity.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Review
  7. Design principles of ciliary signaling.Journal of cell science · 2025
    Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Nephronophthisis: a pathological and genetic perspective.Pediatric nephrology (Berlin, Germany) · 2024
    Review
  20. Article

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Xiaoyu ShiDepartment of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, California 94143, USA.ORCID http://orcid.org/0000-0002-9634-2659
Galo GarciaDepartment of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, California 94143, USA.
Julie C Van De WegheDepartment of Pediatrics, University of Washington Medical Center, Seattle, Washington 98195, USA.
Ryan McGortyDepartment of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, California 94143, USA.
Gregory J PazourProgram in Molecular Medicine, University of Massachusetts Medical School, Biotech II, Suite 213, 373 Plantation Street, Worcester, Massachusetts 01605, USA.ORCID http://orcid.org/0000-0002-6285-8796
Dan DohertyDepartment of Pediatrics, University of Washington Medical Center, Seattle, Washington 98195, USA.
Bo HuangDepartment of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, California 94143, USA.ORCID http://orcid.org/0000-0003-1704-4141
Jeremy F ReiterDepartment of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, California 94143, USA.ORCID http://orcid.org/0000-0002-6512-320X
University of California, San Francisco · USUniversity of Washington Medical Center · USUniversity of Massachusetts Chan Medical School · US

Funding

UCSF Nutrition Obesity Research CenterP30DK098722 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHRISTIAN VAISSE · 2015 to 2026
$14.6M
Intraflagellar Transport Proteins in MiceR01GM060992 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Gregory J Pazour · 2001 to 2026
$10.3M
Hedgehog signaling at the cell's antenna: Smoothened and the primary ciliumR01AR054396 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Jeremy F Reiter · 2007 to 2026
$9.0M
Intellectual and Developmental Disabilities Research CenterU54HD083091 · NICHD · UNIVERSITY OF WASHINGTON · PI GURALNICK, MICHAEL J · 2014 to 2019
$7.9M
Transition zone control of ciliary signalingR01GM095941 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI REITER, JEREMY F · 2011 to 2018
$3.4M
Solving macromolecular complex architecture in situ by super-resolution microscopDP2OD008479 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HUANG, BO · 2011 to 2011
$2.3M
Trafficking of Cystoproteins to the Primary CiliumR01DK103632 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PAZOUR, GREGORY J · 2015 to 2019
$1.9M
Elucidating the Architecture and Mechanism of the Ciliary GateF32GM109714 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GARCIA, GALO · 2015 to 2015
$54k
NIAMS NIH HHS R01 AR054396NICHD NIH HHS U54 HD083091NIDDK NIH HHS P30 DK098722NIDDK NIH HHS R01 DK103632NIGMS NIH HHS F32 GM109714NIGMS NIH HHS R01 GM060992NIGMS NIH HHS R01 GM095941NIH HHS DP2 OD008479
6 · The paper itself

Abstract

Ciliopathies, including nephronophthisis (NPHP), Meckel syndrome (MKS) and Joubert syndrome (JBTS), can be caused by mutations affecting components of the transition zone, a domain near the base of the cilium that controls the protein composition of its membrane. We defined the three-dimensional arrangement of key proteins in the transition zone using two-colour stochastic optical reconstruction microscopy (STORM). NPHP and MKS complex components form nested rings comprised of nine-fold doublets. JBTS-associated mutations in RPGRIP1L or TCTN2 displace certain transition-zone proteins. Diverse ciliary proteins accumulate at the transition zone in wild-type cells, suggesting that the transition zone is a waypoint for proteins entering and exiting the cilium. JBTS-associated mutations in RPGRIP1L disrupt SMO accumulation at the transition zone and the ciliary localization of SMO. We propose that the disruption of transition-zone architecture in JBTS leads to a failure of SMO to accumulate at the transition zone and cilium, disrupting developmental signalling in JBTS.

Indexed as

Abnormalities, MultipleAdaptor Proteins, Signal TransducingAdolescentAdultAnimalsCarrier ProteinsCell LineCerebellumChildCiliaCiliopathiesCytoskeletal ProteinsEye AbnormalitiesFemaleGenetic Predisposition to DiseaseHumansAdaptor Proteins, Signal TransducingCarrier ProteinsCytoskeletal ProteinsFtm protein, mouseMembrane ProteinsNPHP1 protein, humanNphp1 protein, mousePatched-1 ReceptorPtch1 protein, mouseRPGRIP1L protein, humanSmoothened ReceptorSmo protein, mouseTCTN2 protein, human

Identifiers

PMID28846093
PMCPMC5695680
OpenAlexW2618690312

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.