Evidence map›Paper›PMID 28845464›Full record

ArticleBiomedical genetics and genomics2017

Molecular signatures of differential responses to exercise trainings during rehabilitation.

Yi-Wen Chen, Chris Gregory, Fan Ye, Naoe Harafuji, Donovan Lott, San-Huei Lai, Sunita Mathur, Mark Scarborough, Parker Gibbs, Celine Baligand and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Biomedical genetics and genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.2field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Yi-Wen ChenResearch Center for Genetic Medicine, Children's National Medical Center, Washington DC, USA.
Chris GregoryDepartment of Health Sciences and Research, Medical University of South Carolina, Charleston, SC, USA.
Fan YeDepartment of Applied Physiology and Kinesiology, University of Florida, Gainesville, FL, USA.
Naoe HarafujiResearch Center for Genetic Medicine, Children's National Medical Center, Washington DC, USA.
Donovan LottDepartment of Physical Therapy, University of Florida, Gainesville, FL, USA.
San-Huei LaiResearch Center for Genetic Medicine, Children's National Medical Center, Washington DC, USA.
Sunita MathurDepartment of Physical Therapy, University of Toronto, Toronto, Ontario, USA.
Mark ScarboroughDepartment of Orthopaedics and Rehabilitation, University of Florida, Gainesville, FL, USA.
Parker GibbsDepartment of Orthopaedics and Rehabilitation, University of Florida, Gainesville, FL, USA.
Celine BaligandDepartment of Physiology and Functional Genomics, University of Florida, Gainesville, FL, USA.
Krista VandenborneDepartment of Physical Therapy, University of Florida, Gainesville, FL, USA.
University of Florida · USChildren's National · USAmerican Physical Therapy Association · USMedical University of South Carolina · US

Funding

Treating Depression and Enhancing Locomotor Recovery Post-strokeP20GM109040 · NIGMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI KAUTZ, STEVEN A. · 2014 to 2024
$23.5M
NCMRR-DC Core Molecular & Functional Outcome Measures in Rehabilitation MedicineR24HD050846 · NICHD · CHILDREN'S RESEARCH INSTITUTE · PI KNOBLACH, SUSAN M · 2005 to 2014
$8.6M
Molecular Pathphysiology of FSHD muscular dystrophy via genome-wide approachesR01AR052027 · NIAMS · CHILDREN'S RESEARCH INSTITUTE · PI CHEN, YI-WEN · 2007 to 2011
$2.2M
Molecular Signatures of Muscle RehabilitationR01HD048051 · NICHD · UNIVERSITY OF FLORIDA · PI VANDENBORNE, KRISTA H · 2004 to 2009
$1.7M
NIAMS NIH HHS R01 AR052027NICHD NIH HHS R01 HD048051NICHD NIH HHS R24 HD050846NIGMS NIH HHS P20 GM109040
6 · The paper itself

Abstract

The loss and recovery of muscle mass and function following injury and during rehabilitation varies among individuals. While recent expression profiling studies have illustrated transcriptomic responses to muscle disuse and remodeling, how these changes contribute to the physiological responses are not clear. In this study, we quantified the effects of immobilization and subsequent rehabilitation training on muscle size and identified molecular pathways associated with muscle responsiveness in an orthopaedic patient cohort study. The injured leg of 16 individuals with ankle injury was immobilized for a minimum of 4 weeks, followed by a 6-week rehabilitation program. The maximal cross-sectional area (CSA) of the medial gastrocnemius muscle of the immobilized and control legs were determined by T1-weighted axial MRI images. Genome-wide mRNA profiling data were used to identify molecular signatures that distinguish the patients who responded to immobilization and rehabilitation and those who were considered minimal responders.

resultsUsing 6% change as the threshold to define responsiveness, a greater degree of changes in muscle size was noted in high responders (-14.9 ± 3.6%) compared to low responders (0.1 ± 0.0%) during immobilization. In addition, a greater degree of changes in muscle size was observed in high responders (20.5 ± 3.2%) compared to low responders (2.5 ± 0.9%) at 6-week rehabilitation. Microarray analysis showed a higher number of genes differentially expressed in the responders compared to low responders in general; with more expression changes observed at the acute stage of rehabilitation in both groups. Pathways analysis revealed top molecular pathways differentially affected in the groups, including genes involved in mitochondrial function, protein turn over, integrin signaling and inflammation. This study confirmed the extent of muscle atrophy due to immobilization and recovery by exercise training is associated with distinct remodeling signature, which can potentially be used for evaluating and predicting clinical outcomes.

Indexed as

atrophyheat shock proteinsmicroarraymitochondriaresistance training

Identifiers

PMID28845464
PMCPMC5568829
OpenAlexW2621137718

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.