Evidence map›Paper›PMID 28844887›Full record

ArticleCell host & microbe2017

Metabolic, Epigenetic, and Transgenerational Effects of Gut Bacterial Choline Consumption.

Kymberleigh A Romano, Ana Martinez-Del Campo, Kazuyuki Kasahara, Carina L Chittim, Eugenio I Vivas, Daniel Amador-Noguez, Emily P Balskus, Federico E Rey

Abstract read
In one paragraph

Article in Cell host & microbe, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 135 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
135citing papers in PubMed, 1 pooled it
15.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

135 citing papers in PubMed, 1 synthesis or guideline pooled it, 233 citations in OpenAlex.

  1. Pooled it
  2. Gut Microbiome-Dependent Metabolic Pathways and Risk of Lethal Prostate Cancer: Prospective Analysis of a PLCO Cancer Screening Trial Cohort.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2022
    Trial
  3. Trial
  4. Review
  5. Article
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  7. [Research progress on the effects of maternal gut microbiota in gestational obesity on offspring and potential mechanisms].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2026
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
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  16. Article
  17. tRNA mCell discovery · 2026
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  19. Article
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75 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Kymberleigh A RomanoDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI 53706, USA.
Ana Martinez-Del CampoDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138, USA.
Kazuyuki KasaharaDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI 53706, USA.
Carina L ChittimDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138, USA.
Eugenio I VivasDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI 53706, USA.
Daniel Amador-NoguezDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI 53706, USA.
Emily P BalskusDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138, USA. Electronic address: balskus@chemistry.harvard.edu.
Federico E ReyDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI 53706, USA. Electronic address: ferey@wisc.edu.
University of Wisconsin–Madison · USHarvard University · US

Funding

Collaborative Cross of the Microbiome and Metabolic DiseaseR01DK108259 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI REY, FEDERICO E · 2015 to 2019
$2.1M
NIDDK NIH HHS R01 DK108259
6 · The paper itself

Abstract

Choline is an essential nutrient and methyl donor required for epigenetic regulation. Here, we assessed the impact of gut microbial choline metabolism on bacterial fitness and host biology by engineering a microbial community that lacks a single choline-utilizing enzyme. Our results indicate that choline-utilizing bacteria compete with the host for this nutrient, significantly impacting plasma and hepatic levels of methyl-donor metabolites and recapitulating biochemical signatures of choline deficiency. Mice harboring high levels of choline-consuming bacteria showed increased susceptibility to metabolic disease in the context of a high-fat diet. Furthermore, bacterially induced reduction of methyl-donor availability influenced global DNA methylation patterns in both adult mice and their offspring and engendered behavioral alterations. Our results reveal an underappreciated effect of bacterial choline metabolism on host metabolism, epigenetics, and behavior. This work suggests that interpersonal differences in microbial metabolism should be considered when determining optimal nutrient intake requirements.

Indexed as

Epigenesis, GeneticAnimalsBacteriaCholineDNA MethylationFemaleGastrointestinal MicrobiomeHumansIntestinal MucosaIntestinesMaleMetabolic DiseasesMice, Inbred C57BLCholinecholine deficiencyepigeneticsgnotobioticmicrobiometrimethylaminetrimethylamine-N-oxide

Identifiers

PMID28844887
PMCPMC5599363
OpenAlexW2750083495

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.