Evidence map›Paper›PMID 28842777›Full record

ReviewJournal of inherited metabolic disease2018

Advances in metabolome information retrieval: turning chemistry into biology. Part II: biological information recovery.

Abdellah Tebani, Carlos Afonso, Soumeya Bekri

Abstract readReview
In one paragraph

Review in Journal of inherited metabolic disease, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Correlations for untargeted GC × GC-HRTOF-MS metabolomics of colorectal cancer.Metabolomics : Official journal of the Metabolomic Society · 2023
    Article
  5. Review
  6. Protein Is an Intelligent Micelle.Entropy (Basel, Switzerland) · 2023
    Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Abdellah TebaniDepartment of Metabolic Biochemistry, Rouen University Hospital, 76000, Rouen, France.
Carlos AfonsoNormandie Université, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000, Rouen, France.
Soumeya BekriDepartment of Metabolic Biochemistry, Rouen University Hospital, 76000, Rouen, France. soumeya.bekri@chu-rouen.fr.ORCID 0000-0001-6184-7270

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This work reports the second part of a review intending to give the state of the art of major metabolic phenotyping strategies. It particularly deals with inherent advantages and limits regarding data analysis issues and biological information retrieval tools along with translational challenges. This Part starts with introducing the main data preprocessing strategies of the different metabolomics data. Then, it describes the main data analysis techniques including univariate and multivariate aspects. It also addresses the challenges related to metabolite annotation and characterization. Finally, functional analysis including pathway and network strategies are discussed. The last section of this review is devoted to practical considerations and current challenges and pathways to bring metabolomics into clinical environments.

Indexed as

MetabolomeBiologyChemistry Techniques, AnalyticalHumansInformation Storage and RetrievalMetabolomicsResearch DesignChemometricsMass spectrometryMetabolomeMetabolomicsNuclear magnetic resonanceOmics

Identifiers

PMID28842777
PMCPMC5959951

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.