Evidence map›Paper›PMID 28842657›Full record

ArticleScientific reports2017

REST, a master regulator of neurogenesis, evolved under strong positive selection in humans and in non human primates.

Alessandra Mozzi, Franca Rosa Guerini, Diego Forni, Andrea Saul Costa, Raffaello Nemni, Francesca Baglio, Monia Cabinio, Stefania Riva, Chiara Pontremoli, Mario Clerici and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. The Genome-Wide Binding Profile for Human RE1 Silencing Transcription Factor Unveils a Unique Genetic Circuitry in Hippocampus.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  9. A Connectomic Hypothesis for the Hominization of the Brain.Cerebral cortex (New York, N.Y. : 1991) · 2021
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. ANeural plasticity · 2020
    Article
  15. Overexpression of miR-9 in the Nucleus Accumbens Increases Oxycodone Self-Administration.The international journal of neuropsychopharmacology · 2019
    Article
  16. Evidence for functional interactions between the placenta and brain in pregnant mice.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Alessandra MozziBioinformatics, Scientific Institute IRCCS E. MEDEA, 23842, Bosisio Parini, Italy.
Franca Rosa GueriniDon C. Gnocchi Foundation ONLUS, IRCCS, 20148, Milan, Italy.
Diego ForniBioinformatics, Scientific Institute IRCCS E. MEDEA, 23842, Bosisio Parini, Italy.
Andrea Saul CostaDon C. Gnocchi Foundation ONLUS, IRCCS, 20148, Milan, Italy.
Raffaello NemniDon C. Gnocchi Foundation ONLUS, IRCCS, 20148, Milan, Italy.
Francesca BaglioDon C. Gnocchi Foundation ONLUS, IRCCS, 20148, Milan, Italy.
Monia CabinioDon C. Gnocchi Foundation ONLUS, IRCCS, 20148, Milan, Italy.
Stefania RivaBioinformatics, Scientific Institute IRCCS E. MEDEA, 23842, Bosisio Parini, Italy.
Chiara PontremoliBioinformatics, Scientific Institute IRCCS E. MEDEA, 23842, Bosisio Parini, Italy.
Mario ClericiDon C. Gnocchi Foundation ONLUS, IRCCS, 20148, Milan, Italy.
Manuela SironiBioinformatics, Scientific Institute IRCCS E. MEDEA, 23842, Bosisio Parini, Italy.ORCID 0000-0002-2267-5266
Rachele CaglianiBioinformatics, Scientific Institute IRCCS E. MEDEA, 23842, Bosisio Parini, Italy. rachele.cagliani@bp.lnf.it.
IRCCS Eugenio Medea · ITDon Carlo Gnocchi Foundation · ITUniversity of Milan · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcriptional repressor REST regulates many neuronal genes by binding RE1 motifs. About one third of human RE1s are recently evolved and specific to primates. As changes in the activity of a transcription factor reverberate on its downstream targets, we assessed whether REST displays fast evolutionary rates in primates. We show that REST was targeted by very strong positive selection during primate evolution. Positive selection was also evident in the human lineage, with six selected sites located in a region that surrounds a VNTR in exon 4. Analysis of expression data indicated that REST brain expression peaks during aging in humans but not in other primates. Because a REST coding variant (rs3796529) was previously associated with protection from hippocampal atrophy in elderly subjects with mild cognitive impairment (MCI), we analyzed a cohort of Alzheimer disease (AD) continuum patients. Genotyping of two coding variants (rs3796529 and rs2227902) located in the region surrounding the VNTR indicated a role for rs2227902 in modulation of hippocampal volume loss, indirectly confirming a role for REST in neuroprotection. Experimental studies will be instrumental to determine the functional effect of positively selected sites in REST and the role of REST variants in neuropreservation/neurodegeneration.

Indexed as

Selection, GeneticAmino AcidsAnimalsBrainCodonEvolution, MolecularGene ExpressionGene Expression RegulationHumansNeurogenesisPrimatesRE1-Silencing Transcription FactorRepressor ProteinsAmino AcidsCodonRE1-Silencing Transcription FactorRepressor Proteins

Identifiers

PMID28842657
PMCPMC5573535
OpenAlexW2745823492

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.