Evidence map›Paper›PMID 28842624›Full record

ArticleScientific reports2017

Characterization and RNAi-mediated knockdown of Chitin Synthase A in the potato tuber moth, Phthorimaea operculella.

Ahmed M A Mohammed, Mervat R Diab, Mohamed Abdelsattar, Sayed M S Khalil

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 48 citations in OpenAlex.

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  11. Annotation of chitin biosynthesis genes inGigaByte (Hong Kong, China) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Ahmed M A MohammedAgricultural Genetic Engineering Research Institute (AGERI), Agricultural Research Center, 9 Gamaa street, Giza, Egypt. amohoammed00@yahoo.com.
Mervat R DiabAgricultural Genetic Engineering Research Institute (AGERI), Agricultural Research Center, 9 Gamaa street, Giza, Egypt.
Mohamed AbdelsattarAgricultural Genetic Engineering Research Institute (AGERI), Agricultural Research Center, 9 Gamaa street, Giza, Egypt.
Sayed M S KhalilAgricultural Genetic Engineering Research Institute (AGERI), Agricultural Research Center, 9 Gamaa street, Giza, Egypt.
Agricultural Research Center · EGAgricultural Genetic Engineering Research Institute · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chitin is a major component of insect exoskeleton, tracheal system and gut where it is synthesized by chitin synthase (CHS) enzymes. In this paper, we report the isolation and RNAi of chitin synthase A (PhoCHSA) from the potato tuber moth Phthorimaea operculella. The full-length cDNA of PhoCHSA is 5,627 bp with 4,689 bp open reading frame coding for 1,563 amino acids. Structural analysis of conceptual amino acid translation showed three distinct regions found in all known insect CHS proteins; N-terminus region having 9 transmembrane helices, middle catalytic region containing several conserved domains identified in insect CHS enzymes, and C-terminus region containing seven transmembrane spans. Phylogenetic analysis showed that PhoCHSA protein clustered with CHSA enzymes identified from insects from different insect orders. RNAi targeting three different regions of the gene showed different efficacy against potato tuber moth larvae and dsRNA targeting the 5' region has the highest efficacy. Results were verified by qRT-PCR which showed that dsRNA targeting the 5' region caused the highest reduction in PhoCHSA mRNA level. Our results show the importance of selecting the RNAi target region and that chitin synthase A can be a suitable RNAi target for the potato tuber moth control.

Indexed as

Gene Knockdown TechniquesRNA InterferenceAmino Acid SequenceAnimalsChitin SynthaseCloning, MolecularMothsPhenotypePhylogenyRNA, Double-StrandedRNA, Small InterferingSequence Analysis, DNAChitin SynthaseRNA, Double-StrandedRNA, Small Interfering

Identifiers

PMID28842624
PMCPMC5573318
OpenAlexW2747748655

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.