Evidence map›Paper›PMID 28842544›Full record

ArticleApplied and environmental microbiology2017

Probing the Genome-Scale Metabolic Landscape of Bordetella pertussis, the Causative Agent of Whooping Cough.

Filipe Branco Dos Santos, Brett G Olivier, Joost Boele, Vincent Smessaert, Philippe De Rop, Petra Krumpochova, Gunnar W Klau, Martin Giera, Philippe Dehottay, Bas Teusink and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Deep longitudinal multi-omics analysis ofFrontiers in microbiology · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Metabolic Modeling of Wine Fermentation at Genome Scale.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  7. Article
  8. Article
  9. Identification of bioactive metabolites using activity metabolomics.Nature reviews. Molecular cell biology · 2019
    Review
  10. mSphere · 2019
    Article
  11. Article
  12. Article
  13. Constraint-based modeling in microbial food biotechnology.Biochemical Society transactions · 2018
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Filipe Branco Dos SantosSystems Bioinformatics/AIMMS, Vrije University Amsterdam, Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0002-4268-8080
Brett G OlivierSystems Bioinformatics/AIMMS, Vrije University Amsterdam, Amsterdam, The Netherlands.
Joost BoeleSystems Bioinformatics/AIMMS, Vrije University Amsterdam, Amsterdam, The Netherlands.
Vincent SmessaertGSK Vaccines, Rixensart, Belgium.
Philippe De RopGSK Vaccines, Rixensart, Belgium.
Petra KrumpochovaSystems Bioinformatics/AIMMS, Vrije University Amsterdam, Amsterdam, The Netherlands.
Gunnar W KlauCentrum Wiskunde & Informatica (CWI), Amsterdam, The Netherlands.
Martin GieraSystems Bioinformatics/AIMMS, Vrije University Amsterdam, Amsterdam, The Netherlands.
Philippe DehottayGSK Vaccines, Rixensart, Belgium.
Bas TeusinkSystems Bioinformatics/AIMMS, Vrije University Amsterdam, Amsterdam, The Netherlands b.teusink@vu.nl.ORCID http://orcid.org/0000-0003-3929-0423
Philippe GoffinGSK Vaccines, Rixensart, Belgium.
Vrije Universiteit Amsterdam · NLGlaxoSmithKline (Belgium) · BECentrum Wiskunde & Informatica · NLLeiden University Medical Center · NLUniversité Libre de Bruxelles · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Whooping cough is a highly contagious respiratory disease caused by

Indexed as

Bordetella pertussisconstraint-based modelinggenome-scale metabolic modelrational medium designvaccine productionwhooping cough

Identifiers

PMID28842544
PMCPMC5648915
OpenAlexW2747315198

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.