Evidence map›Paper›PMID 28842533›Full record

ArticleThe Plant cell2017

Genomic Analysis of the DNA Replication Timing Program during Mitotic S Phase in Maize (

Emily E Wear, Jawon Song, Gregory J Zynda, Chantal LeBlanc, Tae-Jin Lee, Leigh Mickelson-Young, Lorenzo Concia, Patrick Mulvaney, Eric S Szymanski, George C Allen and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
7.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Organization principles of dynamic three-dimensional genome architecture associated with centromere clustering states.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Crossover patterning in plants.Plant reproduction · 2023
    Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. The 3D Genome: From Structure to Function.International journal of molecular sciences · 2021
    Review
  17. Article
  18. Sequence of the supernumerary B chromosome of maize provides insight into its drive mechanism and evolution.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Emily E WearDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695 emily_wear@ncsu.edu.ORCID http://orcid.org/0000-0003-2002-6980
Jawon SongTexas Advanced Computing Center, University of Texas, Austin, Texas 78758.ORCID http://orcid.org/0000-0002-9916-3816
Gregory J ZyndaTexas Advanced Computing Center, University of Texas, Austin, Texas 78758.ORCID http://orcid.org/0000-0003-4992-9614
Chantal LeBlancCold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724.
Tae-Jin LeeDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695.
Leigh Mickelson-YoungDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695.ORCID http://orcid.org/0000-0002-2848-4970
Lorenzo ConciaDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695.ORCID http://orcid.org/0000-0002-7401-7214
Patrick MulvaneyDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695.
Eric S SzymanskiDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695.ORCID http://orcid.org/0000-0003-2582-6573
George C AllenDepartment of Horticultural Science, North Carolina State University, Raleigh, North Carolina 27695.
Robert A MartienssenCold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724.
Matthew W VaughnTexas Advanced Computing Center, University of Texas, Austin, Texas 78758.ORCID http://orcid.org/0000-0002-1384-4283
Linda Hanley-BowdoinDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695.ORCID http://orcid.org/0000-0001-7999-8595
William F ThompsonDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695.
North Carolina State University · USTexas Advanced Computing CenterCold Spring Harbor Laboratory · US

Funding

Next Generation DNA SequencerS10OD020122 · OD · COLD SPRING HARBOR LABORATORY · PI MCCOMBIE, WILLIAM RICHARD · 2015 to 2015
$523k
6 · The paper itself

Abstract

All plants and animals must replicate their DNA, using a regulated process to ensure that their genomes are completely and accurately replicated. DNA replication timing programs have been extensively studied in yeast and animal systems, but much less is known about the replication programs of plants. We report a novel adaptation of the "Repli-seq" assay for use in intact root tips of maize (

Indexed as

GenomicsBase SequenceChromosomes, PlantDNA Replication TimingDNA Transposable ElementsGenes, PlantMeristemMitosisModels, GeneticS PhaseTandem Repeat SequencesTime FactorsTranscription, GeneticZea maysDNA Transposable Elements

Identifiers

PMID28842533
PMCPMC5635974
OpenAlexW2749628345

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.