Evidence map›Paper›PMID 28842485›Full record

ArticleThe Journal of biological chemistry2017

The MukB-topoisomerase IV interaction is required for proper chromosome compaction.

Rupesh Kumar, Pearl Nurse, Soon Bahng, Chong M Lee, Kenneth J Marians

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. A Topology-Centric View on Mitotic Chromosome Architecture.International journal of molecular sciences · 2017
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Rupesh KumarFrom the Molecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065.
Pearl NurseFrom the Molecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065.
Soon BahngFrom the Molecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065.
Chong M LeeFrom the Molecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065.
Kenneth J MariansFrom the Molecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065 kmarians@sloankettering.edu.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Topoisomerases, Condensins, and Chromosome SegregationR01GM034558 · NIGMS · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI MARIANS, KENNETH J · 1985 to 2017
$6.6M
NCI NIH HHS P30 CA008748NIGMS NIH HHS R01 GM034558
6 · The paper itself

Abstract

The bacterial condensin MukB and the cellular decatenating enzyme topoisomerase IV interact. This interaction stimulates intramolecular reactions catalyzed by topoisomerase IV, supercoiled DNA relaxation, and DNA knotting but not intermolecular reactions such as decatenation of linked DNAs. We have demonstrated previously that MukB condenses DNA by sequestering negative supercoils and stabilizing topologically isolated loops in the DNA. We show here that the MukB-topoisomerase IV interaction stabilizes MukB on DNA, increasing the extent of DNA condensation without increasing the amount of MukB bound to the DNA. This effect does not require the catalytic activity of topoisomerase IV. Cells carrying a

Indexed as

Chromosomal Proteins, Non-HistoneChromosomes, BacterialDNA, BacterialDNA, SuperhelicalDNA Topoisomerase IVEscherichia coliEscherichia coli ProteinsMultiprotein ComplexesMutationChromosomal Proteins, Non-HistoneDNA, BacterialDNA, SuperhelicalDNA Topoisomerase IVEscherichia coli ProteinsMukB protein, E coliMultiprotein ComplexesDNADNA structureDNA topoisomeraseDNA topologynucleic acid enzymology

Identifiers

PMID28842485
PMCPMC5641886

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.