Evidence map›Paper›PMID 28841864›Full record

ArticleMalaria journal2017

Comparison of statistical models to estimate parasite growth rate in the induced blood stage malaria model.

Leesa F Wockner, Isabell Hoffmann, Peter O'Rourke, James S McCarthy, Louise Marquart

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

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  6. Searching for Improved Flu Vaccines-The Time Is Now.The Journal of infectious diseases · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Leesa F WocknerQIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia.
Isabell HoffmannQIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia.
Peter O'RourkeQIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia.
James S McCarthyQIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia. j.mccarthy@uq.edu.au.ORCID 0000-0001-6596-9718
Louise MarquartQIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia.
QIMR Berghofer Medical Research Institute · AUJohannes Gutenberg University Mainz · DEThe University of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe efficacy of vaccines aimed at inhibiting the growth of malaria parasites in the blood can be assessed by comparing the growth rate of parasitaemia in the blood of subjects treated with a test vaccine compared to controls. In studies using induced blood stage malaria (IBSM), a type of controlled human malaria infection, parasite growth rate has been measured using models with the intercept on the y-axis fixed to the inoculum size. A set of statistical models was evaluated to determine an optimal methodology to estimate parasite growth rate in IBSM studies.

methodsParasite growth rates were estimated using data from 40 subjects published in three IBSM studies. Data was fitted using 12 statistical models: log-linear, sine-wave with the period either fixed to 48 h or not fixed; these models were fitted with the intercept either fixed to the inoculum size or not fixed. All models were fitted by individual, and overall by study using a mixed effects model with a random effect for the individual.

resultsLog-linear models and sine-wave models, with the period fixed or not fixed, resulted in similar parasite growth rate estimates (within 0.05 log

conclusionsThe analyses presented in this report confirm that fixing the intercept to the inoculum size influences parasite growth estimates. The most appropriate statistical model to estimate the growth rate of blood-stage parasites in IBSM studies appears to be a log-linear model fitted by individual and with the intercept estimated in the log-linear regression. Future studies should use this model to estimate parasite growth rates.

Indexed as

Models, StatisticalAnimalsHumansMalariaMalaria, FalciparumParasitemiaParasitesPlasmodium falciparumTime FactorsClinical trialControlled human malaria infectionFixed intercept regressionInduced blood stage malariaParasite growth rateStatistical modelling

Identifiers

PMID28841864
PMCPMC5574106
OpenAlexW2747895657

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.