Evidence map›Paper›PMID 28841365›Full record

ArticleTranscription2017

TAF10 and TAF10b partially redundant roles during Drosophila melanogaster morphogenesis.

Z Pahi, B N Borsos, B Vedelek, Y V Shidlovskii, S G Georgieva, I M Boros, T Pankotai

Open access · bronzeAbstract read
In one paragraph

Article in Transcription, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Z Pahia Department of Biochemistry and Molecular Biology , University of Szeged , Szeged , Hungary.ORCID 0000-0002-3428-553X
B N Borsosa Department of Biochemistry and Molecular Biology , University of Szeged , Szeged , Hungary.ORCID 0000-0002-5537-8612
B Vedeleka Department of Biochemistry and Molecular Biology , University of Szeged , Szeged , Hungary.ORCID 0000-0001-6981-0026
Y V Shidlovskiib Institute of Gene Biology, Russian Academy of Sciences , Moscow , Russia.ORCID 0000-0002-3643-9889
S G Georgievab Institute of Gene Biology, Russian Academy of Sciences , Moscow , Russia.ORCID 0000-0003-3665-0390
I M Borosa Department of Biochemistry and Molecular Biology , University of Szeged , Szeged , Hungary.ORCID 0000-0001-8504-9687
T Pankotaia Department of Biochemistry and Molecular Biology , University of Szeged , Szeged , Hungary.ORCID 0000-0001-9810-5465
University of Szeged · HUInstitute of Gene Biology · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription of eukaryotic genes requires the cooperative action of the RNA polymerase complex, the general transcription factors (TFIIB, TFIID, TFIIE, TFIIF and TFIIH) and chromatin modifiers. The TFIID complex contributes to transcriptional activation by several mechanisms and has a subunit with associated histone acetyltransferase (HAT) activity. The histone modifier SAGA complex has both HAT and deubiquitylase (DUB) activities. TFIID and SAGA share several TBP-associated factors (TAFs), but not their HAT subunit. Recently, several duplicated TAF proteins have been identified in higher eukaryotes, but their functional diversity has been so far poorly characterized. Here, we report the functional similarities and differences of TAF10 and TAF10b, the two TAF10 orthologs of Drosophila melanogaster. Results from in silico modeling suggest that dTAF10 and dTAF10b have similar secondary structures characterized by the presence of a histone-fold domain. Additionally, dTAF10 and dTAF10b share interaction partners and show similar expression patterns in neuronal tissues. Nonetheless, dTAF10 and dTAF10b seem to have partly distinct functions. To investigate their roles, we generated dTaf10-dTaf10b double-mutants and rescued the mutant flies with transgenes, which allowed the translation of either dTAF10 or dTAF10b protein. We found that the loss of dTAF10b resulted in pupal lethality, while animals lacking dTAF10 were able to form puparium. dTaf10 mutant adults showed distorted eye morphology. During DNA repair, dTAF10 and dTAF10b act redundantly, suggesting that these proteins have distinct but partially overlapping functions.

Indexed as

AnimalsComputer SimulationDNA RepairDrosophila melanogasterDrosophila ProteinsEyeGene Expression Regulation, DevelopmentalModels, MolecularMorphogenesisMutationNeuronsProtein DomainsProtein Structure, SecondaryTATA-Binding Protein Associated FactorsTranscription Factor TFIIDDrosophila ProteinsTaf10b protein, DrosophilaTaf10 protein, DrosophilaTATA-Binding Protein Associated FactorsTranscription Factor TFIIDDrosophilaSAGATAF10TAF homologueTFIIDtranscription

Identifiers

PMID28841365
PMCPMC5703247
OpenAlexW2745879800

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.