Evidence map›Paper›PMID 28840388›Full record

ArticleEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2017

Molecular screening of multidrug-resistance tuberculosis by a designated public health laboratory in Taiwan.

H-C Lin, C-L Perng, Y-W Lai, F-G Lin, C-J Chiang, H-A Lin, R Jou, T-S Chiueh

Open access · hybridAbstract read
In one paragraph

Article in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Investigation ofFuture science OA · 2020
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

H-C LinGraduate Institute of Medical Sciences, National Defense Medical Center, Taipei, Taiwan, Republic of China.
C-L PerngDivision of Clinical Pathology, Department of Pathology, Tri-Service General Hospital, Taipei, Taiwan, Republic of China.
Y-W LaiDivision of Clinical Pathology, Department of Pathology, Tri-Service General Hospital, Taipei, Taiwan, Republic of China.
F-G LinSchool of Public Health, National Defense Medical Center, Taipei, Taiwan, Republic of China.
C-J ChiangChest Hospital, Ministry of Health and Welfare, Tainan, Taiwan, Republic of China.
H-A LinDivision of Infection, Department of Medicine, Tri-Service General Hospital SongShan Branch, Taipei, Taiwan, Republic of China.
R JouTuberculosis Research Center, Taiwan Centers for Disease Control, No. 161, Kun-Yang Street, Taipei, 11561, Republic of China. rwj@cdc.gov.tw.
T-S ChiuehGraduate Institute of Medical Sciences, National Defense Medical Center, Taipei, Taiwan, Republic of China. hsinchunglin@gmail.com.
Tri-Service General Hospital · TWCenter for Tuberculosis Control of Guangdong Province · CNChest Hospital, Ministry of Health and Welfare · TWNational Defense Medical Center · TWTri-Service General Hospital Songshan Branch · TW

Funding

Taiwan Centers for Disease Control and Tri Service General Hospital, Taiwan, Republic of China grant nos. TSGH C103 193, TSGH C105 188, TSGHSB C104 06 and TSGHSB C105 01
6 · The paper itself

Abstract

This manuscript describes our experience in early identifying MDR-TB cases in high-risk populations by setting up a single-referral molecular diagnosis laboratory in Taiwan. Taiwan Centers for Disease Control designated a single-referral laboratory to provide the GenoType MTBDRplus test for screening high-risk MDR-TB populations nationwide in 2012-2015. A total of 5,838 sputum specimens from 3,308 patients were tested within 3 days turnaround time. Compared with the conventional culture and drug susceptibility testing, the overall performance of the GenoType MTBDRplus test for detecting TB infection showed accuracy of 70.7%, sensitivity of 85.9%, specificity of 65.7%, positive predictive value of 45.5%, and negative predictive value of 93.3%. And the accuracy of detecting rifampin (RIF) resistance, isoniazid (INH) resistance, and MDR-TB (resistant to at least RIF and INH) were 96.5%, 95.2%, and 97.7%, respectively. MDR-TB contacts presented a higher rate of mutated codons 513-519, GenoType MTBDRplus banding pattern: rpoB WT3(-), and rpoB WT4(-) than the treatment failure group. The MDR-TB contact group also had a higher rate of inhA C15T mutation, banding pattern: inhA WT1(-), and inhA MUT1(+) than the recurrent group. Resistance profiles of MDR-TB isolates also varied geographically. The referral molecular diagnosis system contributed to rapid detection and initiation of appropriate therapy.

Indexed as

AdultAgedBacterial ProteinsDNA-Directed RNA PolymerasesDrug Resistance, Multiple, BacterialFemaleGenes, BacterialGenotypeHumansMaleMicrobial Sensitivity TestsMiddle AgedMolecular Diagnostic TechniquesMutationMycobacterium tuberculosisPublic Health SurveillanceBacterial ProteinsDNA-Directed RNA PolymerasesrpoB protein, Mycobacterium tuberculosis

Identifiers

PMID28840388
PMCPMC5688198
OpenAlexW2745455435

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.