Evidence map›Paper›PMID 28839209›Full record

ArticleScientific reports2017

Mapping the key residues of SufB and SufD essential for biosynthesis of iron-sulfur clusters.

Eiki Yuda, Naoyuki Tanaka, Takashi Fujishiro, Nao Yokoyama, Kei Hirabayashi, Keiichi Fukuyama, Kei Wada, Yasuhiro Takahashi

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. The structure of the SufBCbioRxiv : the preprint server for biology · 2026
    Article
  2. Recent Characterization of Key Proteins to Combat Tuberculosis.Advances in experimental medicine and biology · 2026
    Review
  3. Article
  4. A minimal SufBMicrobiology spectrum · 2025
    Article
  5. Article
  6. SmsB-SmsC machinery inApplied and environmental microbiology · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Genome mining ofFrontiers in microbiology · 2024
    Article
  11. TheeLife · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Fe-S cluster biogenesis by the bacterial Suf pathway.Biochimica et biophysica acta. Molecular cell research · 2020
    Review
  18. Roles and maturation of iron-sulfur proteins in plastids.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Review
  19. Iron-sulfur clusters biogenesis by the SUF machinery: close to the molecular mechanism understanding.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Eiki YudaDepartment of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570, Japan.
Naoyuki TanakaDepartment of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570, Japan.
Takashi FujishiroDepartment of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570, Japan.ORCID 0000-0001-7967-8380
Nao YokoyamaDepartment of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570, Japan.
Kei HirabayashiDepartment of Medical Sciences, University of Miyazaki, Miyazaki, 889-1692, Japan.
Keiichi FukuyamaDepartment of Applied Chemistry, Graduate School of Engineering, Osaka University, Osaka, 565-0871, Japan.
Kei WadaDepartment of Medical Sciences, University of Miyazaki, Miyazaki, 889-1692, Japan.
Yasuhiro TakahashiDepartment of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570, Japan. ytaka@mail.saitama-u.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biogenesis of iron-sulfur (Fe-S) clusters is an indispensable process in living cells. In Escherichia coli, the SUF biosynthetic system consists of six proteins among which SufB, SufC and SufD form the SufBCD complex, which serves as a scaffold for the assembly of nascent Fe-S cluster. Despite recent progress in biochemical and structural studies, little is known about the specific regions providing the scaffold. Here we present a systematic mutational analysis of SufB and SufD and map their critical residues in two distinct regions. One region is located on the N-terminal side of the β-helix core domain of SufB, where biochemical studies revealed that Cys254 of SufB (SufB

Identifiers

PMID28839209
PMCPMC5571166

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