Evidence map›Paper›PMID 28839181›Full record

ArticleScientific reports2017

DrwH, a novel WHy domain-containing hydrophobic LEA5C protein from Deinococcus radiodurans, protects enzymatic activity under oxidative stress.

Shijie Jiang, Jin Wang, Xiaoli Liu, Yingying Liu, Cui Guo, Liwen Zhang, Jiahui Han, Xiaoli Wu, Dong Xue, Ahmed E Gomaa and 12 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 25 citations in OpenAlex.

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  6. Pleiotropic roles of late embryogenesis abundant proteins ofComputational and structural biotechnology journal · 2021
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  7. The Novel ncRNA OsiR Positively Regulates Expression ofInternational journal of molecular sciences · 2020
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  12. MiningInternational journal of molecular sciences · 2018
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 3 institutions in 2 countries.

Shijie JiangKey Lab of Bio-resources and Eco-environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, PR China.
Jin WangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Xiaoli LiuBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Yingying LiuBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Cui GuoBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Liwen ZhangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.ORCID 0000-0003-1593-2778
Jiahui HanBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Xiaoli WuBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Dong XueBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Ahmed E GomaaBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Shuai FengBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Heng ZhangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Yun ChenBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Shuzhen PingBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Ming ChenBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Wei ZhangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Liang LiBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Zhengfu ZhouBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Kaijing ZuoPlant Biotechnology Research Center, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Xufeng LiKey Lab of Bio-resources and Eco-environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, PR China.
Yi YangKey Lab of Bio-resources and Eco-environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, PR China.
Min LinBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China. linmin57@vip.163.com.
Chinese Academy of Agricultural Sciences · CNSichuan University · CNShanghai Jiao Tong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Water stress and hypersensitive response (WHy) domain is typically found as a component of atypical late embryogenesis abundant (LEA) proteins closely associated with resistance to multiple stresses in numerous organisms. Several putative LEA proteins have been identified in Deinococcus bacteria; however their precise function remains unclear. This work reports the characterization of a Deinococcus-specific gene encoding a novel WHy domain-containing hydrophobic LEA5C protein (named DrwH) in D. radiodurans R1. The expression of the drwH gene was induced by oxidative and salinity stresses. Inactivation of this gene resulted in increased sensitivity to oxidative and salinity stresses as well as reduced activities of antioxidant enzymes. The WHy domain of the DrwH protein differs structurally from that of a previously studied bacterial LEA5C protein, dWHy1, identified as a gene product from an Antarctic desert soil metagenome library. Further analysis indicated that in E. coli, the function of DrwH is related to oxidative stress tolerance, whereas dWHy1 is associated with freezing-thawing stress tolerance. Under oxidative stress induced by H

Indexed as

Oxidative StressProtein Interaction Domains and MotifsAmino Acid SequenceBacterial ProteinsBase SequenceBinding SitesDeinococcusEnzyme ActivationGene Expression Regulation, BacterialHydrophobic and Hydrophilic InteractionsMicrobial ViabilityMutationProtein BindingProtein Structure, SecondarySalt StressTranscription, GeneticBacterial Proteins

Identifiers

PMID28839181
PMCPMC5570939
OpenAlexW2745945309

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.