ArticleScientific reports2017
CLE peptide-encoding gene families in Medicago truncatula and Lotus japonicus, compared with those of soybean, common bean and Arabidopsis.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 25 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
25 citing papers in PubMed, 56 citations in OpenAlex.
- The white lupin CCR1 receptor-like kinase controls systemic Autoregulation of Cluster Root and Nodule Development.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- Peptide hormones in plants.Molecular horticulture · 2025Review
- Staying hungry: a roadmap to harnessing central regulators of symbiotic nitrogen fixation under fluctuating nitrogen availability.aBIOTECH · 2024Article
- The Role of CLE Peptides in the Suppression of Mycorrhizal Colonization of Tomato.Plant & cell physiology · 2024Article
- Functional Modules in the Meristems: "Tinkering" in Action.Plants (Basel, Switzerland) · 2023Review
- TheInternational journal of molecular sciences · 2023Article
- Article
- Mutation ofFrontiers in plant science · 2023Article
- Innovation and appropriation in mycorrhizal and rhizobial Symbioses.The Plant cell · 2022Article
- Functional and comparative genomics reveals conserved noncoding sequences in the nitrogen-fixing clade.The New phytologist · 2022Article
- Legume-rhizobium dance: an agricultural tool that could be improved?Microbial biotechnology · 2021Review
- Nitrate-induced CLE35 signaling peptides inhibit nodulation through the SUNN receptor and miR2111 repression.Plant physiology · 2021Article
- Molecular Traits and Functional Analysis of the CLAVATA3/Endosperm Surrounding Region-Related Small Signaling Peptides in Three Species ofFrontiers in plant science · 2021Article
- A linkage disequilibrium-based statistical test for Genome-Wide Epistatic Selection Scans in structured populations.Heredity · 2021Article
- Application of Synthetic Peptide CEP1 Increases Nutrient Uptake Rates Along Plant Roots.Frontiers in plant science · 2021Article
- Nitrate-Induced CLE Peptide Systemically Inhibits Nodulation inPlants (Basel, Switzerland) · 2020Article
- The CLE53-SUNN genetic pathway negatively regulates arbuscular mycorrhiza root colonization in Medicago truncatula.Journal of experimental botany · 2020Article
- CLAVATA signaling pathway genes modulating flowering time and flower number in chickpea.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019Article
- Unraveling new molecular players involved in the autoregulation of nodulation in Medicago truncatula.Journal of experimental botany · 2019Article
- The Non-LegumeFrontiers in plant science · 2019Article
Corrections and comments
- Erratum issued
Authors and funding
4 authors at 2 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
CLE peptide hormones are critical regulators of many cell proliferation and differentiation mechanisms in plants. These 12-13 amino acid glycosylated peptides play vital roles in a diverse range of plant tissues, including the shoot, root and vasculature. CLE peptides are also involved in controlling legume nodulation. Here, the entire family of CLE peptide-encoding genes was identified in Medicago truncatula (52) and Lotus japonicus (53), including pseudogenes and non-functional sequences that were identified. An array of bioinformatic techniques were used to compare and contrast these complete CLE peptide-encoding gene families with those of fellow legumes, Glycine max and Phaseolus vulgaris, in addition to the model plant Arabidopsis thaliana. This approach provided insight into the evolution of CLE peptide families and enabled us to establish putative M. truncatula and L. japonicus orthologues. This includes orthologues of nodulation-suppressing CLE peptides and AtCLE40 that controls the stem cell population of the root apical meristem. A transcriptional meta-analysis was also conducted to help elucidate the function of the CLE peptide family members. Collectively, our analyses considerably increased the number of annotated CLE peptides in the model legume species, M. truncatula and L. japonicus, and substantially enhanced the knowledgebase of this critical class of peptide hormones.
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.