Evidence map›Paper›PMID 28835693›Full record

ArticleScientific reports2017

MicroRNA profile for health risk assessment: Environmental exposure to persistent organic pollutants strongly affects the human blood microRNA machinery.

Julian Krauskopf, Theo M de Kok, Dennie G Hebels, Ingvar A Bergdahl, Anders Johansson, Florentin Spaeth, Hannu Kiviranta, Panu Rantakokko, Soterios A Kyrtopoulos, Jos C Kleinjans

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 3 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 3 syntheses or guidelines pooled it, 56 citations in OpenAlex.

  1. Pooled it
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  4. Review
  5. Update on Occupational Cancer for Better Cancer Prevention and Control.Asian Pacific journal of cancer prevention : APJCP · 2024
    Review
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  19. 2,3,7,8-Tetrachlorodibenzo-BioMed research international · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Julian KrauskopfDepartment of Toxicogenomics, Maastricht University, Maastricht, The Netherlands. j.krauskopf@maastrichtuniversity.nl.
Theo M de KokDepartment of Toxicogenomics, Maastricht University, Maastricht, The Netherlands.
Dennie G HebelsDepartment of Toxicogenomics, Maastricht University, Maastricht, The Netherlands.
Ingvar A BergdahlDepartment of Biobank Research, and Occupational and Environmental Medicine, Department of Public Health and Clinical Medicine, Umeå University, Umeå, Sweden.
Anders JohanssonNutrition Research, Department of Public Health and Clinical Medicine, Umeå University, Umeå, Sweden.
Florentin SpaethFaculty of Medicine, Department of Radiation Sciences, Oncology, Umeå University, Umeå, Sweden.
Hannu KivirantaDepartment of Health Protection, Chemicals and Health Unit, National Institute for Health and Welfare, Kuopio, Finland.ORCID 0000-0002-7168-1611
Panu RantakokkoDepartment of Health Protection, Chemicals and Health Unit, National Institute for Health and Welfare, Kuopio, Finland.
Soterios A KyrtopoulosInstitute of Biology, Medicinal Chemistry and Biotechnology, National Hellenic Research Foundation, Athens, Greece.
Jos C KleinjansDepartment of Toxicogenomics, Maastricht University, Maastricht, The Netherlands.
Maastricht University · NLUmeå University · SEFinnish Institute for Health and Welfare · FINational Hellenic Research Foundation · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Persistent organic pollutants (POPs) are synthetic chemical substances that accumulate in our environment. POPs such as polychlorinated biphenyls (PCBs), hexachlorobenzene (HCB) and dichlorodiphenyltrichloroethane (DDT) have been classified as carcinogenic to humans and animals. Due to their resistance to biodegradation humans are still exposed to these compounds worldwide. We aim to evaluate the miRNA and transcriptomic response of a human population exposed to POPs. The miRNA and transcriptomic response was measured in blood of healthy subjects by microarray technology and associated with the serum concentrations of six PCB congeners, DDE (a common DDT metabolite), and HCB. A total of 93 miRNA levels appeared significantly associated with the POP-exposure (FDR < 0.05). The miRNA profile includes four tumor suppressor miRNAs, namely miR-193a-3p, miR-152, miR-31-5p and miR-34a-5p. Integration of the miRNA profile with the transcriptome profile suggests an interaction with oncogenes such as MYC, CCND1, BCL2 and VEGFA. We have shown that exposure to POPs is associated with human miRNA and transcriptomic responses. The identified miRNAs and target genes are related to various types of cancer and involved in relevant signaling pathways like wnt and p53. Therefore, these miRNAs may have great potential to contribute to biomarker-based environmental health risk assessment.

Indexed as

Circulating MicroRNAEnvironmental ExposureEnvironmental PollutantsRisk AssessmentAdultCase-Control StudiesComputational BiologyGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHumansMicroRNAsMiddle AgedNeoplasmsTranscriptomeCirculating MicroRNAEnvironmental PollutantsMicroRNAs

Identifiers

PMID28835693
PMCPMC5569060
OpenAlexW2748253088

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.