Evidence map›Paper›PMID 28835212›Full record

ArticleBMC infectious diseases2017

Spondylodiscitis due to Parvimonas micra diagnosed by the melting temperature mapping method: a case report.

Yoshitsugu Higashi, Shigeki Nakamura, Hideki Niimi, Tomohiro Ueno, Kaoru Matsumoto, Koyomi Kawago, Ippei Sakamaki, Isao Kitajima, Yoshihiro Yamamoto

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC infectious diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Spondylodiscitis of lumbar complicated with spinal epidural abscess caused byZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2023
    Review
  4. Article
  5. Severe pneumonia with empyema caused byThe Journal of international medical research · 2023
    Article
  6. Article
  7. Infection Route ofHealthcare (Basel, Switzerland) · 2022
    Review
  8. Observational
  9. Osteomyelitis of the Distal Phalanx of the Thumb due toOpen forum infectious diseases · 2020
    Article
  10. BMJ case reports · 2019
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Yoshitsugu HigashiDepartment of Clinical Infectious Diseases, Graduate School of Medicine and Pharmaceutical Sciences for Research, University of Toyama, Toyama, Japan.
Shigeki NakamuraDepartment of Chemotherapy and Mycoses, National Institutes of Infectious Diseases, Tokyo, Japan.
Hideki NiimiDepartment of Laboratory Medicine, Toyama University Hospital, Toyama, Japan.
Tomohiro UenoDepartment of Laboratory Medicine, Toyama University Hospital, Toyama, Japan.
Kaoru MatsumotoDepartment of Clinical Infectious Diseases, Graduate School of Medicine and Pharmaceutical Sciences for Research, University of Toyama, Toyama, Japan.
Koyomi KawagoDepartment of Clinical Infectious Diseases, Graduate School of Medicine and Pharmaceutical Sciences for Research, University of Toyama, Toyama, Japan.
Ippei SakamakiDepartment of Clinical Infectious Diseases, Graduate School of Medicine and Pharmaceutical Sciences for Research, University of Toyama, Toyama, Japan.
Isao KitajimaDepartment of Laboratory Medicine, Toyama University Hospital, Toyama, Japan.
Yoshihiro YamamotoDepartment of Clinical Infectious Diseases, Graduate School of Medicine and Pharmaceutical Sciences for Research, University of Toyama, Toyama, Japan. yamamoto@med.u-toyama.ac.jp.
University of Toyama · JPToyama University Hospital · JPNational Institute of Infectious Diseases · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIt has been suggested that more than 100 bacterial species can be identified using only seven universal bacterial primer sets in the melting temperature (Tm) mapping method and that these findings can be obtained within 3 h of sterile site collection. CASE PRESENTATION: A 67-year-old Japanese man with type 2 diabetes visited our hospital complaining of progressive lower back pain for 2 months. The patient was suspected to have spondylodiscitis on magnetic resonance imaging of the spine. Blood culture and transcutaneous vertebral biopsy were subsequently performed. Using the Tm mapping method, Parvimonas micra was detected from a transcutaneous vertebral biopsy specimen in 3 h. Gram-positive cocci were also detected by Gram staining and P. micra was identified directly from the anaerobic blood culture by matrix-assisted laser desorption ionization-time of flight mass spectrometry. Four days after admission, the biopsy specimen culture isolate was identified as P. micra.

conclusionsThe Tm mapping method may be useful for the diagnosis of bacterial infections where diagnosis is challenging because of the difficulty of culturing.

Indexed as

AgedDiabetes Mellitus, Type 2DiscitisDNA PrimersGram-Positive Bacterial InfectionsHumansMagnetic Resonance ImagingMalePeptostreptococcusSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationSpineTemperatureDNA PrimersMelting temperature mapping methodParvimonas micraSpondylodiscitis

Identifiers

PMID28835212
PMCPMC5569488
OpenAlexW2747819145

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.