Evidence map›Paper›PMID 28834722›Full record

ArticleBiophysical journal2017

Does Ceramide Form Channels? The Ceramide-Induced Membrane Permeabilization Mechanism.

Ibai Artetxe, Begoña Ugarte-Uribe, David Gil, Mikel Valle, Alicia Alonso, Ana J García-Sáez, Félix M Goñi

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Lipid Self-Assemblies under the Atomic Force Microscope.International journal of molecular sciences · 2021
    Review
  5. Article
  6. Article
  7. Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Ibai ArtetxeBiofisika Institute (CSIC, UPV/EHU) and Department of Biochemistry, University of the Basque Country, Leioa, Spain.
Begoña Ugarte-UribeMembrane Biophysics, Interfaculty Institute of Biochemistry, Eberhard Karls University Tübingen, Tübingen, Germany.
David GilStructural Biology Unit, Center for Cooperative Research in Biosciences, CIC bioGUNE, Derio, Spain.
Mikel ValleStructural Biology Unit, Center for Cooperative Research in Biosciences, CIC bioGUNE, Derio, Spain.
Alicia AlonsoBiofisika Institute (CSIC, UPV/EHU) and Department of Biochemistry, University of the Basque Country, Leioa, Spain.
Ana J García-SáezMembrane Biophysics, Interfaculty Institute of Biochemistry, Eberhard Karls University Tübingen, Tübingen, Germany.
Félix M GoñiBiofisika Institute (CSIC, UPV/EHU) and Department of Biochemistry, University of the Basque Country, Leioa, Spain. Electronic address: felix.goni@ehu.es.
Biofisika · ESCIC bioGUNE · ESUniversity of Tübingen · DEUniversity of the Basque Country · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ceramide is a sphingolipid involved in several cellular processes, including apoptosis. It has been proposed that ceramide forms large and stable channels in the mitochondrial outer membrane that induce cell death through direct release of cytochrome c. However, this mechanism is still debated because the membrane permeabilizing activity of ceramide remains poorly understood. To determine whether the mechanism of ceramide-induced membrane leakage is consistent with the hypothesis of an apoptotic ceramide channel, we have used here assays of calcein release from liposomes. When assaying liposomes containing sphingomyelin and cholesterol, we observed an overall gradual phenomenon of contents release, together with some all-or-none leakage (at low ceramide concentrations or short times). The presence of channels in the bilayer should cause only an all-or-none leakage. When liposomes poor in sphingomyelin/cholesterol or mimicking the lipid composition of the mitochondrial outer membrane were tested, we did not detect any leakage. In consequence, the hypothesis of formation of large ceramide channels in the membrane is not consistent with our results. Instead we propose that the presence of ceramide in one of the membrane monolayers causes a surface area mismatch between both monolayers, which leads to vesicle collapse. The gradual phenomenon of calcein release would be due to a competition between two ceramide effects; namely, lateral segregation that facilitates permeabilization, and at longer times, trans-bilayer flip-flop that opposes asymmetric lateral segregation and causes a mismatch.

Indexed as

Cell Membrane PermeabilityCeramidesCholesterolDose-Response Relationship, DrugFluoresceinsLiposomesSphingomyelinsCeramidesCholesterolFluoresceinsfluorexonLiposomesSphingomyelins

Identifiers

PMID28834722
PMCPMC5567600
OpenAlexW2746927754

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.