Evidence map›Paper›PMID 28834719›Full record

ArticleBiophysical journal2017

Conversion of OprO into an OprP-like Channel by Exchanging Key Residues in the Channel Constriction.

Sonalli Ganguly, Anusha Kesireddy, Iván Bárcena-Uribarri, Ulrich Kleinekathöfer, Roland Benz

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 11 citations in OpenAlex.

  1. Understanding Drug Permeability inLife (Basel, Switzerland) · 2025
    Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sonalli GangulyDepartment of Life Sciences and Chemistry, Jacobs University Bremen, Bremen, Germany. Electronic address: sonalliganguly@gmail.com.
Anusha KesireddyDepartment of Physics and Earth Sciences, Jacobs University Bremen, Bremen, Germany.
Iván Bárcena-UribarriDepartment of Life Sciences and Chemistry, Jacobs University Bremen, Bremen, Germany.
Ulrich KleinekathöferDepartment of Physics and Earth Sciences, Jacobs University Bremen, Bremen, Germany.
Roland BenzDepartment of Life Sciences and Chemistry, Jacobs University Bremen, Bremen, Germany.
Constructor University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Under phosphate-limiting conditions, the channels OprP and OprO are induced and expressed in the outer membrane of Pseudomonas aeruginosa. Despite their large homology, the phosphate-specific OprP and the diphosphate-specific OprO pores show structural differences in their binding sites situated in the constriction region. Previously, it was shown that the mutation of amino acids in OprP (Y62F and Y114D) led to an exchange in substrate specificity similar to OprO. To support the role of these key amino acids in the substrate sorting of these specific channels, the reverse mutants for OprO (F62Y, D114Y, and F62Y/D114Y) were created in this study. The phosphate and diphosphate binding of the generated channels was studied in planar lipid bilayers. Our results show that mutations of key residues indeed reverse the substrate specificity of OprO to OprP and support the view that just a few strategically positioned amino acids are mainly responsible for its substrate specificity.

Indexed as

Ion Channel GatingBacterial ProteinsCell MembraneMolecular Dynamics SimulationPorinsProtein ConformationProtein TransportPseudomonas aeruginosaSubstrate SpecificityBacterial ProteinsOprO protein, Pseudomonas aeruginosaoprP protein, Pseudomonas aeruginosaPorins

Identifiers

PMID28834719
PMCPMC5567594
OpenAlexW2750182539

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.