Evidence map›Paper›PMID 28834331›Full record

ArticleMicrobiologyOpen2017

Core fecal microbiota of domesticated herbivorous ruminant, hindgut fermenters, and monogastric animals.

Michelle M O' Donnell, Hugh M B Harris, R Paul Ross, Paul W O'Toole

Abstract read
In one paragraph

Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed.

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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Michelle M O' DonnellFood Biosciences Department, Teagasc Food Research Centre, Cork, Ireland.ORCID 0000-0001-8073-2057
Hugh M B HarrisDepartment of Microbiology, University College Cork, Cork, Ireland.
R Paul RossFood Biosciences Department, Teagasc Food Research Centre, Cork, Ireland.
Paul W O'TooleDepartment of Microbiology, University College Cork, Cork, Ireland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this pilot study, we determined the core fecal microbiota composition and overall microbiota diversity of domesticated herbivorous animals of three digestion types: hindgut fermenters, ruminants, and monogastrics. The 42 animals representing 10 animal species were housed on a single farm in Ireland and all the large herbivores consumed similar feed, harmonizing two of the environmental factors that influence the microbiota. Similar to other mammals, the fecal microbiota of all these animals was dominated by the Firmicutes and Bacteroidetes phyla. The fecal microbiota spanning all digestion types comprised 42% of the genera identified. Host phylogeny and, to a lesser extent, digestion type determined the microbiota diversity in these domesticated herbivores. This pilot study forms a platform for future studies into the microbiota of nonbovine and nonequine domesticated herbivorous animals.

Indexed as

Animals, DomesticHerbivoryMicrobiotaRuminantsAnimalsBiodiversityCluster AnalysisFecesGastrointestinal MicrobiomeHigh-Throughput Nucleotide SequencingMetagenomeMetagenomicsPhylogenyRNA, Ribosomal, 16SRumenRNA, Ribosomal, 16Sdietherbivorehindgutmicrobiotamonogastricruminant

Identifiers

PMID28834331
PMCPMC5635170

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.