Evidence map›Paper›PMID 28833537›Full record

ArticleJournal of veterinary internal medicine2017

GM2 Gangliosidosis in Shiba Inu Dogs with an In-Frame Deletion in HEXB.

A Kolicheski, G S Johnson, N A Villani, D P O'Brien, T Mhlanga-Mutangadura, D A Wenger, K Mikoloski, J S Eagleson, J F Taylor, R D Schnabel and 1 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Journal of veterinary internal medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 19 citations in OpenAlex.

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  8. A HomozygousGenes · 2023
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  12. Animal Model Contributions to Congenital Metabolic Disease.Advances in experimental medicine and biology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

A KolicheskiDepartment of Veterinary Pathobiology, University of Missouri, Columbia, MO.
G S JohnsonDepartment of Veterinary Pathobiology, University of Missouri, Columbia, MO.ORCID http://orcid.org/0000-0003-2225-3204
N A VillaniDepartment of Veterinary Pathobiology, University of Missouri, Columbia, MO.
D P O'BrienDepartment of Veterinary Medicine and Surgery, University of Missouri, Columbia, MO.
T Mhlanga-MutangaduraDepartment of Veterinary Pathobiology, University of Missouri, Columbia, MO.
D A WengerDepartment of Neurology, Jefferson Medical College, Philadelphia, PA.
K MikoloskiPittsburgh Veterinary Specialty and Emergency Center, Pittsburgh, PA.
J S EaglesonVeterinary Specialty and Emergency Center, Blue Pearl Veterinary Partners, Levittown, PA.
J F TaylorDivision of Animal Sciences, University of Missouri, Columbia, MO.
R D SchnabelDivision of Animal Sciences and Informatics Institute, University of Missouri, Columbia, MO.
M L KatzMason Eye Institute, University of Missouri, Columbia, MO.
Missouri College · USUniversity of Missouri · USJefferson College · USUniversity of Pittsburgh · USVeterinary Medical Center · JPVirginia Mason Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Consistent with a tentative diagnosis of neuronal ceroid lipofuscinosis (NCL), autofluorescent cytoplasmic storage bodies were found in neurons from the brains of 2 related Shiba Inu dogs with a young-adult onset, progressive neurodegenerative disease. Unexpectedly, no potentially causal NCL-related variants were identified in a whole-genome sequence generated with DNA from 1 of the affected dogs. Instead, the whole-genome sequence contained a homozygous 3 base pair (bp) deletion in a coding region of HEXB. The other affected dog also was homozygous for this 3-bp deletion. Mutations in the human HEXB ortholog cause Sandhoff disease, a type of GM2 gangliosidosis. Thin-layer chromatography confirmed that GM2 ganglioside had accumulated in an affected Shiba Inu brain. Enzymatic analysis confirmed that the GM2 gangliosidosis resulted from a deficiency in the HEXB encoded protein and not from a deficiency in products from HEXA or GM2A, which are known alternative causes of GM2 gangliosidosis. We conclude that the homozygous 3-bp deletion in HEXB is the likely cause of the Shiba Inu neurodegenerative disease and that whole-genome sequencing can lead to the early identification of potentially disease-causing DNA variants thereby refocusing subsequent diagnostic analyses toward confirming or refuting candidate variant causality.

Indexed as

Gene DeletionAnimalsbeta-Hexosaminidase beta ChainDog DiseasesDogsFemaleGangliosidoses, GM2HomozygoteMicroscopy, Electronbeta-Hexosaminidase beta ChainAutofluorescent storage bodiesLysosomal storage diseaseNeuronal ceroid lipofuscinosisSandhoff diseaseWhole-genome sequence

Identifiers

PMID28833537
PMCPMC5598891
OpenAlexW2747405063

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.