Evidence map›Paper›PMID 28831291›Full record

ArticleProcedia computer science2017

Numerical simulation of a compound capsule in a constricted microchannel.

John Gounley, Erik W Draeger, Amanda Randles

Abstract read
In one paragraph

Article in Procedia computer science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Enhancing Adaptive Physics Refinement Simulations Through the Addition of Realistic Red Blood Cell Counts.International Conference for High Performance Computing, Networking, Storage and Analysis : [proceedings]. SC (Conference : Supercomputing) · 2023
    Article
  3. Distributed Acceleration of Adhesive Dynamics Simulations.Proceedings of 2022 29th European MPI Users' Group Meeting (EuroMPI/USA'2022) : September 26-28, 2022, Chattanooga, TN. European MPI Users' Group Meeting (29th : 2022 : Chattanooga, Tenn.) · 2022
    Article
  4. High Performance Adaptive Physics Refinement to Enable Large-Scale Tracking of Cancer Cell Trajectory.Proceedings. IEEE International Conference on Cluster Computing · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Multi-GPU Immersed Boundary Method Hemodynamics Simulations.Journal of computational science · 2020
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

John GounleyDepartment of Biomedical Engineering, Duke University, Durham, NC.
Erik W DraegerCenter for Applied Scientific Computing, Lawrence Livermore National Laboratory, Livermore, CA.
Amanda RandlesDepartment of Biomedical Engineering, Duke University, Durham, NC.

Funding

Toward coupled multiphysics models of hemodynamics on leadership systemsDP5OD019876 · OD · UNIVERSITY OF CALIF-LAWRNC LVRMR NAT LAB · PI RANDLES, AMANDA E · 2014 to 2018
$2.0M
NIH HHS DP5 OD019876
6 · The paper itself

Abstract

Simulations of the passage of eukaryotic cells through a constricted channel aid in studying the properties of cancer cells and their transport in the bloodstream. Compound capsules, which explicitly model the outer cell membrane and nuclear lamina, have the potential to improve computational model fidelity. However, general simulations of compound capsules transiting a constricted microchannel have not been conducted and the influence of the compound capsule model on computational performance is not well known. In this study, we extend a parallel hemodynamics application to simulate the fluid-structure interaction between compound capsules and fluid. With this framework, we compare the deformation of simple and compound capsules in constricted microchannels, and explore how deformation depends on the capillary number and on the volume fraction of the inner membrane. The computational framework's parallel performance in this setting is evaluated and future development lessons are discussed.

Indexed as

capsulesfluid-structure interactionlattice Boltzmannparallel computing

Identifiers

PMID28831291
PMCPMC5563447

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.