Evidence map›Paper›PMID 28831035›Full record

ArticleScientific reports2017

Molecular Phylogeny and Revision of Copepod Orders (Crustacea: Copepoda).

Sahar Khodami, J Vaun McArthur, Leocadio Blanco-Bercial, Pedro Martinez Arbizu

RetractedAbstract readRetracted Publication
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
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  6. Review
  7. Evolution of DNA Methylation Across Ecdysozoa.Journal of molecular evolution · 2022
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  14. Four newZooKeys · 2020
    Article
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  19. Description ofZooKeys · 2019
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Sahar KhodamiSenckenberg am Meer, German Center for Marine Biodiversity Research, Südstrand 44, 26382, Wilhelmshaven, Germany. sahar.khodami@senckenberg.de.
J Vaun McArthurSavannah River Ecology Laboratory, Aiken, SC, USA.
Leocadio Blanco-BercialBermuda Institute of Ocean Sciences (BIOS), Hamilton St. Georges, Bermuda.
Pedro Martinez ArbizuSenckenberg am Meer, German Center for Marine Biodiversity Research, Südstrand 44, 26382, Wilhelmshaven, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

For the first time, the phylogenetic relationships between representatives of all 10 copepod orders have been investigated using 28S and 18S rRNA, Histone H3 protein and COI mtDNA. The monophyly of Copepoda (including Platycopioida Fosshagen, 1985) is demonstrated for the first time using molecular data. Maxillopoda is rejected, as it is a polyphyletic group. The monophyly of the major subgroups of Copepoda, including Progymnoplea Lang, 1948 (=Platycopioida); Neocopepoda Huys and Boxshall, 1991; Gymnoplea Giesbrecht, 1892 (=Calanoida Sars, 1903); and Podoplea Giesbrecht, 1892, are supported in this study. Seven copepod orders are monophyletic, including Platycopioida, Calanoida, Misophrioida Gurney, 1933; Monstrilloida Sars, 1901; Siphonostomatoida Burmeister, 1834; Gelyelloida Huys, 1988; and Mormonilloida Boxshall, 1979. Misophrioida (=Propodoplea Lang, 1948) is the most basal Podoplean order. The order Cyclopoida Burmeister, 1835, is paraphyletic and now encompasses Poecilostomatoida Thorell, 1859, as a sister to the family Schminkepinellidae Martinez Arbizu, 2006. Within Harpacticoida Sars, 1903, both sections, Polyarthra Lang, 1948, and Oligoarthra Lang, 1948, are monophyletic, but not sister groups. The order Canuelloida is proposed while maintaining the order Harpacticoida s. str. (Oligoarthra). Cyclopoida, Harpacticoida and Cyclopinidae are redefined, while Canuelloida ordo. nov., Smirnovipinidae fam. nov. and Cyclopicinidae fam. nov are proposed as new taxa.

Indexed as

AnimalsCopepodaDNA, RibosomalEvolution, MolecularHistonesPhylogenyRNA, Ribosomal, 18SRNA, Ribosomal, 28SSequence Analysis, DNADNA, RibosomalHistonesRNA, Ribosomal, 18SRNA, Ribosomal, 28S

Identifiers

PMID28831035
PMCPMC5567239

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.