Evidence map›Paper›PMID 28827832›Full record

ArticlePLoS genetics2017

mlh3 mutations in baker's yeast alter meiotic recombination outcomes by increasing noncrossover events genome-wide.

Najla Al-Sweel, Vandana Raghavan, Abhishek Dutta, V P Ajith, Luigi Di Vietro, Nabila Khondakar, Carol M Manhart, Jennifer A Surtees, K T Nishant, Eric Alani

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 44 citations in OpenAlex.

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  15. Molecular basis of the dual role of the Mlh1-Mlh3 endonuclease in MMR and in meiotic crossover formation.Proceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Najla Al-SweelDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.
Vandana RaghavanDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.
Abhishek DuttaSchool of Biology, Indian Institute of Science Education and Research Thiruvananthapuram, Trivandrum, India.ORCID http://orcid.org/0000-0003-2256-6956
V P AjithSchool of Biology, Indian Institute of Science Education and Research Thiruvananthapuram, Trivandrum, India.ORCID http://orcid.org/0000-0003-2436-9657
Luigi Di VietroDepartment of Life Sciences and Systems Biology, University of Turin, Via Verdi, Turin, Italy.ORCID http://orcid.org/0000-0002-6578-7575
Nabila KhondakarDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.
Carol M ManhartDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.
Jennifer A SurteesDepartment of Biochemistry, University at Buffalo, State University of New York, Buffalo, New York, United States of America.
K T NishantSchool of Biology, Indian Institute of Science Education and Research Thiruvananthapuram, Trivandrum, India.ORCID http://orcid.org/0000-0002-4342-7501
Eric AlaniDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.ORCID http://orcid.org/0000-0002-5011-9339
Cornell University · USIndian Institute of Science Education and Research Thiruvananthapuram · INUniversity at Buffalo, State University of New York · USUniversity of Turin · IT

Funding

Roles for Mismatch Repair Proteins in Maintaining Genome StabilityR01GM053085 · NIGMS · CORNELL UNIVERSITY ITHACA · PI ALANI, ERIC E. · 1995 to 2019
$7.3M
Characterizing an Endonuclease Ensemble in Meiotic Crossing OverF32GM112435 · NIGMS · CORNELL UNIVERSITY · PI MANHART, CAROL M · 2014 to 2016
$164k
NIGMS NIH HHS F32 GM112435NIGMS NIH HHS R01 GM053085Wellcome Trust
6 · The paper itself

Abstract

Mlh1-Mlh3 is an endonuclease hypothesized to act in meiosis to resolve double Holliday junctions into crossovers. It also plays a minor role in eukaryotic DNA mismatch repair (MMR). To understand how Mlh1-Mlh3 functions in both meiosis and MMR, we analyzed in baker's yeast 60 new mlh3 alleles. Five alleles specifically disrupted MMR, whereas one (mlh3-32) specifically disrupted meiotic crossing over. Mlh1-mlh3 representatives for each class were purified and characterized. Both Mlh1-mlh3-32 (MMR+, crossover-) and Mlh1-mlh3-45 (MMR-, crossover+) displayed wild-type endonuclease activities in vitro. Msh2-Msh3, an MSH complex that acts with Mlh1-Mlh3 in MMR, stimulated the endonuclease activity of Mlh1-mlh3-32 but not Mlh1-mlh3-45, suggesting that Mlh1-mlh3-45 is defective in MSH interactions. Whole genome recombination maps were constructed for wild-type and MMR+ crossover-, MMR- crossover+, endonuclease defective and null mlh3 mutants in an S288c/YJM789 hybrid background. Compared to wild-type, all of the mlh3 mutants showed increases in the number of noncrossover events, consistent with recombination intermediates being resolved through alternative recombination pathways. Our observations provide a structure-function map for Mlh3 that reveals the importance of protein-protein interactions in regulating Mlh1-Mlh3's enzymatic activity. They also illustrate how defective meiotic components can alter the fate of meiotic recombination intermediates, providing new insights for how meiotic recombination pathways are regulated.

Indexed as

AllelesCrossing Over, GeneticDNA Mismatch RepairGenome, FungalHomologous RecombinationMeiosisMutL Protein Homolog 1MutL ProteinsProtein Interaction MapsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsStructure-Activity RelationshipMLH1 protein, S cerevisiaeMLH3 protein, S cerevisiaeMutL Protein Homolog 1MutL ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID28827832
PMCPMC5578695
OpenAlexW2746221599

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.