Evidence map›Paper›PMID 28827675›Full record

ArticleScientific reports2017

Predicting blooms of toxic cyanobacteria in eutrophic lakes with diverse cyanobacterial communities.

Aleksandra Bukowska, Tomasz Kaliński, Michał Koper, Iwona Kostrzewska-Szlakowska, Jan Kwiatowski, Hanna Mazur-Marzec, Iwona Jasser

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  5. International journal of environmental research and public health · 2022
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  11. Review
  12. Radiation Tolerance ofFrontiers in microbiology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Aleksandra BukowskaDepartment of Microbial Ecology & Environmental Biotechnology, Faculty of Biology, Biological and Chemical Research Centre, University of Warsaw, Żwirki i Wigury 101, 02-089, Warszawa, Poland.
Tomasz KalińskiDepartment of Microbial Ecology & Environmental Biotechnology, Faculty of Biology, Biological and Chemical Research Centre, University of Warsaw, Żwirki i Wigury 101, 02-089, Warszawa, Poland.
Michał KoperInstitute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, A. Pawińskiego 5a, 02-106, Warszawa, Poland.
Iwona Kostrzewska-SzlakowskaFaculty of Biology, University of Warsaw, I. Miecznikowa 1, 02-096, Warszawa, Poland.
Jan KwiatowskiDepartment of Phylogenetics and Evolution, Faculty of Biology, Biological and Chemical Research Centre, University of Warsaw, Żwirki i Wigury 101, 02-089, Warszawa, Poland.
Hanna Mazur-MarzecDepartment of Marine Biotechnology, Institute of Oceanography, University of Gdańsk, al. Marszałka Piłsudskiego 46, 81-378, Gdynia, Poland.
Iwona JasserDepartment of Plant Ecology & Environmental Conservation, Faculty of Biology, Biological and Chemical Research Centre, University of Warsaw, Żwirki i Wigury 101, 02-089, Warszawa, Poland. jasser.iwona@biol.uw.edu.pl.
University of Warsaw · PLUniversity of Gdańsk · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We investigated possibility of predicting whether blooms, if they occur, would be formed of microcystin-producing cyanobacteria. DGGE analysis of 16S-ITS and mcyA genes revealed that only Planktothrix and Microcystis possessed mcy-genes and Planktothrix was the main microcystin producer. qPCR analysis revealed that the proportion of cells with mcy-genes in Planktothrix populations was almost 100%. Microcystin concentration correlated with the number of potentially toxic and total Planktothrix cells and the proportion of Planktothrix within all cyanobacteria, but not with the proportion of cells with mcy-genes in total Planktothrix. The share of Microcystis cells with mcy-genes was low and variable in time. Neither the number of mcy-possessing cells, nor the proportion of these cells in total Microcystis, correlated with the concentration of microcystins. This suggests that it is possible to predict whether the bloom in the Masurian Lakes will be toxic based on Planktothrix occurrence. Two species of toxin producing Planktothrix, P. agardhii and P. rubescens, were identified by phylogenetic analysis of 16S-ITS. Based on morphological and ecological features, the toxic Planktothrix was identified as P. agardhii. However, the very high proportion of cells with mcy-genes suggests P. rubescens. Our study reveals the need of universal primers for mcyA genes from environment.

Indexed as

Harmful Algal BloomBacterial ProteinsBacterial ToxinsCyanobacteriaDNA, BacterialGene Expression Regulation, BacterialLakesMicrocystinsMicrocystisPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNABacterial ProteinsBacterial ToxinsDNA, BacterialmicrocystinMicrocystinsRNA, Ribosomal, 16S

Identifiers

PMID28827675
PMCPMC5566422
OpenAlexW2744721675

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.